CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Tal_R010719
(
Tyto alba
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Tal_R010719
T333875_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Tal_R010719
Sox
1
30
QTMSSKEKGKFEEMAKGDKARYDREMKNYI
Tal_R010719
Sox
37
86
KGKKKDPNAPKRPPKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR
Links
Other
Sox
family TFs
Other
Tyto alba
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_06482
Ancylostoma duodenale
ANCDUO_06482
N
0.484
ENSTGUG00000006267
Taeniopygia guttata
ENSTGUG00000006267
N
0.471
Gfo_R010508
Geospiza fortis
Gfo_R010508
N
0.471
L889_g18776
Steinernema feltiae
L889_g18776
N
0.449
HMGB1
Tupaia belangeri
ENSTBEG00000013046
N
0.447
ENSETEG00000016379
Echinops telfairi
ENSETEG00000016379
N
0.436