CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.1.4496.1
(
Mycosphaerella fijiensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
e_gw1.1.4496.1
T333966_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
fmf-1
M02491_2.00
Neurospora crassa
TCTTTGTY
RACAAAGA
PBM
Weirauch et al.(2014)
pTH8941
0.451
0.590
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.1.4496.1
Sox
1
61
MLYRSAYANRTKQWCSQNNHQVVSAVAGESWPMEPEEVRNQFDEWAKTERQHHQEAHPQYK
Links
Other
Sox
family TFs
Other
Mycosphaerella fijiensis
TFs
137 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action