estExt_fgenesh1_pg.C_90227 (Micromonas pusilla)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 estExt_fgenesh1_pg.C_90227 T334001_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_90227 Sox 19 94
estExt_fgenesh1_pg.C_90227 Sox 122 198
estExt_fgenesh1_pg.C_90227 Sox 222 290

Links

Other Sox family TFs
Other Micromonas pusilla TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29908.m006148 Ricinus communis 29908.m006148 N
Ciclev10002696m.g Citrus clementina Ciclev10002696m.g N
Cla000688 Citrullus lanatus Cla000688 N
evm.TU.supercontig_36.17 Carica papaya evm.TU.supercontig_36.17 N
gene11124-v1.0-hybrid Fragaria vesca gene11124-v1.0-hybrid N
Gorai.009G243500 Gossypium raimondii Gorai.009G243500 N
orange1.1g030905m.g Citrus sinensis orange1.1g030905m.g N
POPTR_0002s08740 Populus trichocarpa POPTR_0002s08740 N
POPTR_0005s15990 Populus trichocarpa POPTR_0005s15990 N
SapurV1A.0010s0820 Salix purpurea SapurV1A.0010s0820 N
TCM_035057 Theobroma cacao TCM_035057 N