CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.16.190.1
(
Phycomyces blakesleeanus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
gw1.16.190.1
T334228_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.16.190.1
Sox
11
76
PVKPPSAYIMFSNHARTELKDQNLTFSELAKIVGDRWKNLSFAEKQEYERTAMRAKDEYSAQFDRY
Links
Other
Sox
family TFs
Other
Phycomyces blakesleeanus
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgeneshMC_pg.1_#_1771
Mucor circinelloides
fgeneshMC_pg.1_#_1771
I
0.580
estExt_fgeneshMC_pg.C_20910
Mucor circinelloides
estExt_fgeneshMC_pg.C_20910
I
0.571
gw1.72.30.1
Phycomyces blakesleeanus
gw1.72.30.1
I
0.565
RO3G_07013
Rhizopus oryzae
RO3G_07013
I
0.564
RO3G_07543
Rhizopus oryzae
RO3G_07543
I
0.552
RO3G_15755
Rhizopus oryzae
RO3G_15755
I
0.549
e_gw1.30.104.1
Phycomyces blakesleeanus
e_gw1.30.104.1
N
0.533
RO3G_16060
Rhizopus oryzae
RO3G_16060
I
0.529
fgeneshMC_pg.3_#_1190
Mucor circinelloides
fgeneshMC_pg.3_#_1190
I
0.529
RO3G_09728
Rhizopus oryzae
RO3G_09728
I
0.515
AOL_s00076g81
Arthrobotrys oligospora
AOL_s00076g81
I
0.509
GSTUM_00011974001
Tuber melanosporum
GSTUM_00011974001
I
0.503
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
0.500
SAPIO_CDS3355
Scedosporium apiospermum
SAPIO_CDS3355
I
0.473
MELLADRAFT_85039
Melampsora laricipopulina
MELLADRAFT_85039
I
0.463
MDOA008605
Musca domestica
MDOA008605
N
0.460
PV09_06039
Verruconis gallopava
PV09_06039
N
0.449
ENSGMOG00000013406
Gadus morhua
ENSGMOG00000013406
N
0.448
MGG_01641
Magnaporthe oryzae
MGG_01641
I
0.447
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.445
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.445
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.445
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.445
FFUJ_02729
Fusarium fujikuroi
FFUJ_02729
I
0.443
S40288_09735
Stachybotrys chartarum
S40288_09735
I
0.443
ENSONIG00000016627
Oreochromis niloticus
ENSONIG00000016627
N
0.442
HelroG145107
Helobdella robusta
HelroG145107
N
0.442
fgenesh2_pg.scaffold_177000008
Branchiostoma floridae
fgenesh2_pg.scaffold_177000008
N
0.442
fgenesh2_pg.scaffold_19000069
Branchiostoma floridae
fgenesh2_pg.scaffold_19000069
N
0.442
XP_002936155
Xenopus tropicalis
XP_002936155
N
0.442
E5Q_03709
Mixia osmundae
E5Q_03709
N
0.441
tox4b
Danio rerio
ENSDARG00000100163
I
0.440
tox2
Gasterosteus aculeatus
ENSGACG00000006914
N
0.440
ENSGGOG00000025016
Gorilla gorilla
ENSGGOG00000025016
I
0.440
ENSGMOG00000008081
Gadus morhua
ENSGMOG00000008081
N
0.440
ENSMMUG00000014077
Macaca mulatta
ENSMMUG00000014077
N
0.440
tox2
Oryzias latipes
ENSORLG00000004818
N
0.440
ENSPFOG00000002336
Poecilia formosa
ENSPFOG00000002336
N
0.440
ENSPFOG00000008402
Poecilia formosa
ENSPFOG00000008402
N
0.440
ENSSSCG00000023554
Sus scrofa
ENSSSCG00000023554
N
0.440
ENSTGUG00000003811
Taeniopygia guttata
ENSTGUG00000003811
N
0.440
tox2
Tetraodon nigroviridis
ENSTNIG00000005683
N
0.440
tox2
Takifugu rubripes
ENSTRUG00000013848
N
0.440
ENSXMAG00000016763
Xiphophorus maculatus
ENSXMAG00000016763
N
0.440
17746
Aureococcus anophagefferens
17746
I
0.440
tox4.S
Xenopus laevis
XB-GENE-993810
I
0.440
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
0.439
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
0.439
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
0.439
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
0.439
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
0.439
MAJ_04030
Metarhizium majus
MAJ_04030
I
0.439
MANI_030028
Metarhizium anisopliae
MANI_030028
I
0.439
MBR_01483
Metarhizium brunneum
MBR_01483
I
0.439
MGU_02157
Metarhizium guizhouense
MGU_02157
I
0.439
X797_001988
Metarhizium robertsii
X797_001988
I
0.439
PGTG_10028
Puccinia graminis
PGTG_10028
I
0.433
PGTG_12120
Puccinia graminis
PGTG_12120
I
0.433
ACRE_011600
Acremonium chrysogenum
ACRE_011600
I
0.432
UCRNP2_5474
Neofusicoccum parvum
UCRNP2_5474
N
0.429
LCUP006200
Lucilia cuprina
LCUP006200
N
0.426
OIDMADRAFT_143526
Oidiodendron maius
OIDMADRAFT_143526
I
0.424
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.419
FPSE_02664
Fusarium pseudograminearum
FPSE_02664
I
0.418
ENSCING00000009516
Ciona intestinalis
ENSCING00000009516
N
0.417
ENSCSAVG00000009270
Ciona savignyi
ENSCSAVG00000009270
N
0.417
M408DRAFT_328926
Serendipita vermifera
M408DRAFT_328926
I
0.415