CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.6.301.1
(
Phycomyces blakesleeanus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
gw1.6.301.1
T334258_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.6.301.1
Sox
2
69
VTRPPNAFLLFNKEMRKQLKDQNPTMKVAEISKEIGGRWKCLNQVDKDRYVAEAERLKDHQRALNPNA
Links
Other
Sox
family TFs
Other
Phycomyces blakesleeanus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_52776
Rhizophagus irregularis
GLOINDRAFT_52776
I
0.489
GB51010
Apis mellifera
GB51010
I
0.467
CGI_10003963
Crassostrea gigas
CGI_10003963
I
0.450
NV14822
Nasonia vitripennis
NV14822
I
0.434
ENSPMAG00000002631
Petromyzon marinus
ENSPMAG00000002631
I
0.433
GSMUA_AchrUn_randomG05290_001
Musa acuminata
GSMUA_AchrUn_randomG05290_001
I
0.429
A1O1_07971
Capronia coronata
A1O1_07971
I
0.420
DAPPUDRAFT_313324
Daphnia pulex
DAPPUDRAFT_313324
I
0.420
HBP1
Ornithorhynchus anatinus
ENSOANG00000003174
I
0.420
M378DRAFT_9762
Amanita muscaria
M378DRAFT_9762
N
0.416