Pavir.J08546 (Panicum virgatum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Pavir.J08546 T334684_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J08546.1.p Sox 465 533

Links

Other Sox family TFs
Other Panicum virgatum TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_04210 Capronia coronata A1O1_04210 I
A1O3_01208 Capronia epimyces A1O3_01208 I
A1O7_02237 Cladophialophora yegresii A1O7_02237 I
ACRE_005470 Acremonium chrysogenum ACRE_005470 I
ARB_02172 Arthroderma benhamiae ARB_02172 I
BAUCODRAFT_276951 Baudoinia compniacensis BAUCODRAFT_276951 N
BBA_07483 Beauveria bassiana BBA_07483 N
BDDG_03512 Blastomyces dermatitidis BDDG_03512 I
CCM_08924 Cordyceps militaris CCM_08924 N
CHGG_10488 Chaetomium globosum CHGG_10488 N
DOTSEDRAFT_69470 Dothistroma septosporum DOTSEDRAFT_69470 N
fgeneshMC_pg.4_#_1012 Mucor circinelloides fgeneshMC_pg.4_#_1012 N
fgeneshMC_pg.5_#_674 Mucor circinelloides fgeneshMC_pg.5_#_674 I
FOMPIDRAFT_73073 Fomitopsis pinicola FOMPIDRAFT_73073 N
G647_08748 Cladophialophora carrionii G647_08748 I
H101_07555 Trichophyton interdigitale H101_07555 I
H102_00527 Trichophyton rubrum H102_00527 I
H105_00515 Trichophyton soudanense H105_00515 I
HCBG_01276 Histoplasma capsulatum HCBG_01276 I
HMPREF1120_08360 Exophiala dermatitidis HMPREF1120_08360 I
HMPREF1541_00486 Cyphellophora europaea HMPREF1541_00486 I
MCYG_00012 Arthroderma otae MCYG_00012 I
MCYG_00012 Microsporum canis MCYG_00012 I
MGYG_07213 Microsporum gypseum MGYG_07213 I
MPH_10251 Macrophomina phaseolina MPH_10251 I
MYCFIDRAFT_150893 Pseudocercospora fijiensis MYCFIDRAFT_150893 N
MYCTH_2316740 Myceliophthora thermophila MYCTH_2316740 N
PAAG_12580 Paracoccidioides sp lutzii PAAG_12580 I
PABG_06099 Paracoccidioides brasiliensis PABG_06099 I
PV04_02419 Capronia semiimmersa PV04_02419 I
PV07_02787 Cladophialophora immunda PV07_02787 I
RO3G_15999 Rhizopus oryzae RO3G_15999 N
SEPMUDRAFT_146995 Sphaerulina musiva SEPMUDRAFT_146995 N
TEQG_08786 Trichophyton equinum TEQG_08786 I
TRV_00423 Trichophyton verrucosum TRV_00423 I
UCRNP2_8340 Neofusicoccum parvum UCRNP2_8340 I
VHEMI01778 Torrubiella hemipterigena VHEMI01778 N
W97_09232 Coniosporium apollinis W97_09232 N
Z517_00401 Fonsecaea pedrosoi Z517_00401 I
Z518_01931 Rhinocladiella mackenziei Z518_01931 I
Z519_11346 Cladophialophora bantiana Z519_11346 I