SapurV1A.0869s0080 (Salix purpurea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SapurV1A.0869s0080 T334718_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0869s0080.1.p Sox 173 213
SapurV1A.0869s0080.2.p Sox 173 213
SapurV1A.0869s0080.3.p Sox 162 202

Links

Other Sox family TFs
Other Salix purpurea TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI02G35580 Oryza rufipogon ORUFI02G35580 I 0.622
OGLUM02G35200 Oryza glumaepatula OGLUM02G35200 I 0.622
ONIVA02G36110 Oryza nivara ONIVA02G36110 I 0.622
OMERI02G32400 Oryza meridionalis OMERI02G32400 I 0.622
cassava19406.valid.m1 Manihot esculenta cassava19406.valid.m1 N 0.606
30116.m000393 Ricinus communis 30116.m000393 N 0.652
Cucsa.239250 Cucumis sativus Cucsa.239250 N 0.576
mgf000387m Mimulus guttatus mgf000387m N 0.622
mgf013454m Mimulus guttatus mgf013454m N 0.622
Aquca_014_00165 Aquilegia coerulea Aquca_014_00165 N 0.610
Ciclev10001601m.g Citrus clementina Ciclev10001601m.g N 0.626
Ciclev10001827m.g Citrus clementina Ciclev10001827m.g N 0.613
evm.TU.supercontig_49.133 Carica papaya evm.TU.supercontig_49.133 N 0.505
evm.TU.supercontig_49.134 Carica papaya evm.TU.supercontig_49.134 N 0.562
gene11787-v1.0-hybrid Fragaria vesca gene11787-v1.0-hybrid N 0.576
Gorai.005G260200 Gossypium raimondii Gorai.005G260200 N 0.591
MDP0000597087 Malus domestica MDP0000597087 N 0.547
MDP0000634922 Malus domestica MDP0000634922 N 0.508
orange1.1g017878m.g Citrus sinensis orange1.1g017878m.g N 0.626
orange1.1g020440m.g Citrus sinensis orange1.1g020440m.g N 0.613
Pavir.Aa00349 Panicum virgatum Pavir.Aa00349 N 0.622
Pavir.J01310 Panicum virgatum Pavir.J01310 N 0.622
SapurV1A.0647s0030 Salix purpurea SapurV1A.0647s0030 N 0.631
Thhalv10028879m.g Eutrema salsugineum Thhalv10028879m.g N 0.458
PK04394.1 Cannabis sativa PK04394.1 N 0.568
PK16821.1 Cannabis sativa PK16821.1 N 0.570
OS02G0770600 Oryza sativa OS02G0770600 N 0.622
BRADI3G57700 Brachypodium distachyon BRADI3G57700 N 0.616
F775_20121 Aegilops tauschii F775_20121 N 0.656
GSMUA_Achr2G01240_001 Musa acuminata GSMUA_Achr2G01240_001 N 0.572
GSMUA_Achr8G18160_001 Musa acuminata GSMUA_Achr8G18160_001 N 0.523
LPERR02G27910 Leersia perrieri LPERR02G27910 N 0.622
MLOC_54605 Hordeum vulgare MLOC_54605 N 0.656
OB02G40920 Oryza brachyantha OB02G40920 N 0.616
OB07G29110 Oryza brachyantha OB07G29110 N 0.622
OBART02G34050 Oryza barthii OBART02G34050 N 0.622
OLONG_015646 Oryza longistaminata OLONG_015646 N 0.622
OPUNC02G31450 Oryza punctata OPUNC02G31450 N 0.622
ORGLA02G0294700 Oryza glaberrima ORGLA02G0294700 N 0.622
BGIOSGA009119 Oryza indica BGIOSGA009119 N 0.622
PGSC0003DMG400023744 Solanum tuberosum PGSC0003DMG400023744 N 0.567
PGSC0003DMG400026151 Solanum tuberosum PGSC0003DMG400026151 N 0.599
POPTR_0001s21610 Populus trichocarpa POPTR_0001s21610 N 0.741
POPTR_0003s01620 Populus trichocarpa POPTR_0003s01620 N 0.614
PRUPE_ppa007591mg Prunus persica PRUPE_ppa007591mg N 0.583
Si017699m.g Setaria italica Si017699m.g N 0.622
TCM_006422 Theobroma cacao TCM_006422 N 0.612
Traes_6DL_647FC758E1 Triticum aestivum Traes_6DL_647FC758E1 N 0.656
TRIUR3_20834 Triticum urartu TRIUR3_20834 N 0.656
VIT_12s0034g00960 Vitis vinifera VIT_12s0034g00960 N 0.630
VIT_18s0001g03950 Vitis vinifera VIT_18s0001g03950 N 0.558
Cla002005 Citrullus lanatus Cla002005 N 0.576