LCUP018488 (Lucilia cuprina)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 LCUP018488 T334879_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP018488-PA Sox 154 211

Links

Other Sox family TFs
Other Lucilia cuprina TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
D917_01243 Trichinella nativa D917_01243 N 0.551
D917_08464 Trichinella nativa D917_08464 N 0.551
PDK_20s1781681g001 Phoenix dactylifera PDK_20s1781681g001 N 0.511
Traes_7AL_364A6E96F Triticum aestivum Traes_7AL_364A6E96F N 0.505
Traes_7DL_0CEFCB39D Triticum aestivum Traes_7DL_0CEFCB39D N 0.505
CTRG_00206 Candida tropicalis CTRG_00206 I 0.503
LEMA_P074670.1 Leptosphaeria maculans LEMA_P074670.1 I 0.495
W97_04494 Coniosporium apollinis W97_04494 I 0.495
MLOC_68913 Hordeum vulgare MLOC_68913 N 0.494
TTAC_0000838901 Hydatigera taeniaeformis TTAC_0000838901 N 0.488
EFA77534.1 Polysphondylium pallidum EFA77534.1 N 0.483
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.482
Traes_7BL_F45C15FA2 Triticum aestivum Traes_7BL_F45C15FA2 N 0.476
MCINX003696 Melitaea cinxia MCINX003696 N 0.475
BGLB013830 Biomphalaria glabrata BGLB013830 N 0.475
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.473
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.473
SVUK_0000827101 Strongylus vulgaris SVUK_0000827101 N 0.471
A1O9_02443 Exophiala aquamarina A1O9_02443 I 0.470
HMPREF1541_00911 Cyphellophora europaea HMPREF1541_00911 I 0.470
Traes_3DL_21C50DDF5 Triticum aestivum Traes_3DL_21C50DDF5 N 0.468
A1O1_04933 Capronia coronata A1O1_04933 I 0.465
DILT_0001977801 Diphyllobothrium latum DILT_0001977801 N 0.461
gw1.88.46.1 Fragilariopsis cylindrus gw1.88.46.1 N 0.456
H072_9301 Dactylellina haptotyla H072_9301 N 0.447
GPLIN_000847800 Globodera pallida GPLIN_000847800 N 0.446
MDP0000242568 Malus domestica MDP0000242568 I 0.444
PFICI_01816 Pestalotiopsis fici PFICI_01816 N 0.437
Gorai.011G042300 Gossypium raimondii Gorai.011G042300 N 0.436
HMG20B Pan troglodytes ENSPTRG00000010268 I 0.427
HelroG167700 Helobdella robusta HelroG167700 N 0.427
TPHA_0M01480 Tetrapisispora phaffii TPHA_0M01480 I 0.425
CAGL0H08541g Candida glabrata CAGL0H08541g I 0.422
F775_32121 Aegilops tauschii F775_32121 N 0.422
PredSwiss_CON4.1 Pneumocystis carinii PredSwiss_CON4.1 N 0.418
PPAI008151 Phlebotomus papatasi PPAI008151 N 0.415