PK00252.1 (Cannabis sativa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 PK00252.1 T334921_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK00252.1 Sox 1 26

Links

Other Sox family TFs
Other Cannabis sativa TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WUBG_12101 Wuchereria bancrofti WUBG_12101 N 0.601
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N 0.590
SOX10 Echinops telfairi ENSETEG00000012633 I 0.585
SOX8 Echinops telfairi ENSETEG00000015470 N 0.585
SOX9 Echinops telfairi ENSETEG00000020237 I 0.585
SOX8 Microcebus murinus ENSMICG00000011516 I 0.585
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I 0.585
SMAR007058 Strigamia maritima SMAR007058 N 0.585
Afo_R012388 Aptenodytes forsteri Afo_R012388 N 0.585
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N 0.585
Ogr00751 Ophisaurus gracilis Ogr00751 I 0.585
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N 0.585
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I 0.584
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N 0.582
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I 0.582
SOX8 Callithrix jacchus ENSCJAG00000002684 I 0.582
SOX8 Felis catus ENSFCAG00000004219 N 0.582
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I 0.582
SOX9 Myotis lucifugus ENSMLUG00000030312 I 0.582
ENSSHAG00000008406 Sarcophilus harrisii ENSSHAG00000008406 I 0.582
SOX9 Tupaia belangeri ENSTBEG00000000175 N 0.582
ENSP00000409273 Macaca fascicularis ENSP00000409273 I 0.582
Minc18937 Meloidogyne incognita Minc18937 N 0.580
L898_g4879 Steinernema monticolum L898_g4879 N 0.578
YQE_03817 Dendroctonus ponderosae YQE_03817 N 0.576
AMAM004028 Anopheles maculatus AMAM004028 N 0.576
AMEC007393 Anopheles melas AMEC007393 N 0.576
AMIN001220 Anopheles minimus AMIN001220 N 0.576
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N 0.574
CPIJ014017 Culex quinquefasciatus CPIJ014017 N 0.574
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N 0.574
LotgiG143673 Lottia gigantea LotgiG143673 N 0.574
HHAL000218-PA Halyomorpha halys HHAL000218-PA N 0.574
LDEC018263 Leptinotarsa decemlineata LDEC018263 N 0.574
AFUN006689 Anopheles funestus AFUN006689 N 0.574
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.567
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.566
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N 0.566
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N 0.561
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.561
Hmg20b Mus musculus ENSMUSG00000020232 D 0.560
HmN_000301900 Hymenolepis microstoma HmN_000301900 N 0.559
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N 0.555
67303 Aureococcus anophagefferens 67303 N 0.552
L798_00185 Zootermopsis nevadensis L798_00185 N 0.541
HMEL013676 Heliconius melpomene HMEL013676 N 0.540
JL09_g5343 Pichia kudriavzevii JL09_g5343 N 0.536
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.533
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N 0.529
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I 0.529
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.528
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I 0.527
SOX18 Procavia capensis ENSPCAG00000015663 N 0.527
SOX18 Pan troglodytes ENSPTRG00000030459 I 0.527
SOX17 Sorex araneus ENSSARG00000009573 I 0.527
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I 0.527
ISCW001638 Ixodes scapularis ISCW001638 N 0.527
ACUA008827 Anopheles culicifacies ACUA008827 N 0.527
AEPI007652 Anopheles epiroticus AEPI007652 N 0.527
ENSNLEG00000002693 Nomascus leucogenys ENSNLEG00000002693 N 0.523
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N 0.522
BGIBMGA003081 Bombyx mori BGIBMGA003081 N 0.522
CPIJ012041 Culex quinquefasciatus CPIJ012041 N 0.522
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.522
L798_12046 Zootermopsis nevadensis L798_12046 N 0.522
CLEC006960 Cimex lectularius CLEC006960 N 0.522
LDEC017494 Leptinotarsa decemlineata LDEC017494 N 0.522
AALB009867 Anopheles albimanus AALB009867 N 0.522
ACOM022799 Anopheles coluzzii ACOM022799 N 0.522
ACUA010594 Anopheles culicifacies ACUA010594 N 0.522
AEPI003629 Anopheles epiroticus AEPI003629 N 0.522
AFUN010198 Anopheles funestus AFUN010198 N 0.522
AMIN009302 Anopheles minimus AMIN009302 N 0.522
AQUA001261 Anopheles quadriannulatus AQUA001261 N 0.522
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.522
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N 0.521
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N 0.521
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N 0.521
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N 0.521
Sox17 Mus musculus ENSMUSG00000025902 D 0.521
MPER_06248 Moniliophthora perniciosa MPER_06248 N 0.521
Ogr11176 Ophisaurus gracilis Ogr11176 N 0.521
AATE016483 Anopheles atroparvus AATE016483 N 0.521
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N 0.521
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.520
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N 0.517
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N 0.514
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N 0.514
ECPE_0001383301 Echinostoma caproni ECPE_0001383301 N 0.512
Cla016375 Citrullus lanatus Cla016375 N 0.507
SOX9 Ochotona princeps ENSOPRG00000007860 N 0.503
TVAG_114290 Trichomonas vaginalis TVAG_114290 N 0.500
yakG000714 Bos grunniens yakG000714 N 0.494
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.491
F443_09320 Phytophthora parasitica F443_09320 N 0.485
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.485
AAEL000771 Aedes aegypti AAEL000771 N 0.483
AGAP028091 Anopheles gambiae AGAP028091 N 0.483
Sox6 Dipodomys ordii ENSDORG00000013073 N 0.483
ENSVPAG00000008729 Vicugna pacos ENSVPAG00000008729 N 0.483
PHUM433280 Pediculus humanus PHUM433280 N 0.483
SINV16572 Solenopsis invicta SINV16572 N 0.483
TC009856 Tribolium castaneum TC009856 N 0.483
ACUA012732 Anopheles culicifacies ACUA012732 N 0.483
AEPI007948 Anopheles epiroticus AEPI007948 N 0.483
AFUN009317 Anopheles funestus AFUN009317 N 0.483
AMAM023617 Anopheles maculatus AMAM023617 N 0.483
AMEC011653 Anopheles melas AMEC011653 N 0.483
AMEM002834 Anopheles merus AMEM002834 N 0.483
ASTEI06131 Anopheles stephensi ASTEI06131 N 0.483
L798_05432 Zootermopsis nevadensis L798_05432 N 0.480
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N 0.477
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N 0.477
BBX Sorex araneus ENSSARG00000008353 N 0.477
fgenesh_scip_prom.28083.3150 Phytophthora lateralis fgenesh_scip_prom.28083.3150 N 0.477
Phyra76615 Phytophthora ramorum Phyra76615 N 0.477
Physo127875 Phytophthora sojae Physo127875 N 0.477
Aan_R006397 Calypte anna Aan_R006397 N 0.477
Gfo_R008143 Geospiza fortis Gfo_R008143 N 0.477
fgenesh1_pm.C_scaffold_23000166 Phytophthora capsici fgenesh1_pm.C_scaffold_23000166 N 0.477
BGLB010902 Biomphalaria glabrata BGLB010902 N 0.454
M422DRAFT_54734 Sphaerobolus stellatus M422DRAFT_54734 N 0.453
SapurV1A.0237s0190 Salix purpurea SapurV1A.0237s0190 N 0.453
SOX2 Felis catus ENSFCAG00000029205 I 0.447
SOX2 Procavia capensis ENSPCAG00000003690 I 0.447
SINV19749 Solenopsis invicta SINV19749 N 0.447
ADIR005631 Anopheles dirus ADIR005631 N 0.447
ASTEI06408 Anopheles stephensi ASTEI06408 N 0.447
SOX18 Echinops telfairi ENSETEG00000001816 N 0.445
ENSPCAG00000014137 Procavia capensis ENSPCAG00000014137 N 0.445
LEF1 Tursiops truncatus ENSTTRG00000008109 N 0.445
TCF7L2 Vicugna pacos ENSVPAG00000008158 N 0.445
HelroG68905 Helobdella robusta HelroG68905 N 0.445
Ogr13852 Ophisaurus gracilis Ogr13852 N 0.445
ENSPMAG00000004519 Petromyzon marinus ENSPMAG00000004519 N 0.439
DILT_0001419401 Diphyllobothrium latum DILT_0001419401 N 0.439
MESCA006364 Megaselia scalaris MESCA006364 N 0.438
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N 0.435
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N 0.435
VDBG_04936 Verticillium albo atrum VDBG_04936 N 0.434
VDBG_04936 Verticillium alfalfae VDBG_04936 N 0.434
TRIUR3_17277 Triticum urartu TRIUR3_17277 N 0.431
CBN25334 Caenorhabditis brenneri CBN25334 N 0.428
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.428
AMEM007694 Anopheles merus AMEM007694 N 0.428
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.427
Myotis_brandtii_TFAM_10031378 Myotis brandtii Myotis_brandtii_TFAM_10031378 N 0.427
UCREL1_237 Eutypa lata UCREL1_237 N 0.426
M7I_1506 Glarea lozoyensis M7I_1506 N 0.423
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.420
68433 Aureococcus anophagefferens 68433 N 0.419
ANCCEY_05358 Ancylostoma ceylanicum ANCCEY_05358 N 0.419
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.418
LbrM.21.1660 Leishmania braziliensis LbrM.21.1660 N 0.416