CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sjc_0086690
(
Schistosoma japonicum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Sjc_0086690
T334980_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPRT0000008159
Sox
152
201
IGYSQFFQEIQSAIKFEHPAASFHDICQLVDKRWNQLSKIEKKSFYRRFL
Links
Other
Sox
family TFs
Other
Schistosoma japonicum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMRZ_0001007401
Schistosoma margrebowiei
SMRZ_0001007401
N
0.683
SROB_0001114901
Schistosoma rodhaini
SROB_0001114901
N
0.683
A_06639
Schistosoma haematobium
A_06639
N
0.619
TRE_0000389001
Trichobilharzia regenti
TRE_0000389001
N
0.579
Smp_129970
Schistosoma mansoni
Smp_129970
N
0.507
pbrm1l
Danio rerio
ENSDARG00000077038
N
0.452
pbrm1l
Tetraodon nigroviridis
ENSTNIG00000014731
N
0.446
pbrm1l
Takifugu rubripes
ENSTRUG00000005335
N
0.446
TVAG_453060
Trichomonas vaginalis
TVAG_453060
N
0.437
ENSMPUG00000007386
Mustela putorius furo
ENSMPUG00000007386
I
0.420
Hba_16915
Heterorhabditis bacteriophora
Hba_16915
I
0.416