SMU15016767 (Schmidtea mediterranea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SMU15016767 T335014_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15016767 Sox 10 80
SMU15016767 Sox 99 165

Links

Other Sox family TFs
Other Schmidtea mediterranea TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.563
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.561
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.561
TsM_000115400 Taenia solium TsM_000115400 N 0.561
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.541
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.541
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.530
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.530
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.514
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.514
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.514
T265_12733 Opisthorchis viverrini T265_12733 N 0.514
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.513
D915_00818 Fasciola hepatica D915_00818 N 0.513
Smp_000980 Schistosoma mansoni Smp_000980 N 0.501
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.501
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.501
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.501
SMAR013695 Strigamia maritima SMAR013695 N 0.500
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.500
MDOA008812 Musca domestica MDOA008812 N 0.500
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.498
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.493
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.493
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.492
Dsp1 Drosophila melanogaster FBgn0011764 N 0.486
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.486
GF19115 Drosophila ananassae FBgn0096126 N 0.486
GG17955 Drosophila erecta FBgn0110175 N 0.486
GH12282 Drosophila grimshawi FBgn0119761 N 0.486
GI10980 Drosophila mojavensis FBgn0133743 N 0.486
GD17278 Drosophila simulans FBgn0188840 N 0.486
GJ19445 Drosophila virilis FBgn0206588 N 0.486
GK25058 Drosophila willistoni FBgn0227017 N 0.486
GE17263 Drosophila yakuba FBgn0234741 N 0.486
LCUP007363 Lucilia cuprina LCUP007363 N 0.486
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.484
AAEL011380 Aedes aegypti AAEL011380 N 0.482
ADAC001494 Anopheles darlingi ADAC001494 N 0.482
AGAP000005 Anopheles gambiae AGAP000005 N 0.482
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.482
AALB006743 Anopheles albimanus AALB006743 N 0.482
AARA010318 Anopheles arabiensis AARA010318 N 0.482
AATE018776 Anopheles atroparvus AATE018776 N 0.482
ACUA021022 Anopheles culicifacies ACUA021022 N 0.482
ADIR011701 Anopheles dirus ADIR011701 N 0.482
AEPI002924 Anopheles epiroticus AEPI002924 N 0.482
AFAF003948 Anopheles farauti AFAF003948 N 0.482
AFUN010134 Anopheles funestus AFUN010134 N 0.482
AMAM015540 Anopheles maculatus AMAM015540 N 0.482
AMEC021909 Anopheles melas AMEC021909 N 0.482
AMEM017336 Anopheles merus AMEM017336 N 0.482
AMIN005344 Anopheles minimus AMIN005344 N 0.482
ASIS000124 Anopheles sinensis ASIS000124 N 0.482
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.480
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.478
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.478
ASIS009950 Anopheles sinensis ASIS009950 N 0.477
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.475
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.475
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.475
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.475
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.475
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.472
AATE010886 Anopheles atroparvus AATE010886 N 0.471
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.470
ACEP16613 Atta cephalotes ACEP16613 N 0.469
NV15664 Nasonia vitripennis NV15664 N 0.469
SINV22586 Solenopsis invicta SINV22586 N 0.469
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.469
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.469
SMU15030485 Schmidtea mediterranea SMU15030485 N 0.469
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.468
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.468
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.468
HMEL007340 Heliconius melpomene HMEL007340 N 0.467
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.466
HDID_0000408601 Hymenolepis diminuta HDID_0000408601 N 0.465
csin110255 Clonorchis sinensis csin110255 N 0.464
D915_15256 Fasciola hepatica D915_15256 N 0.464
HNAJ_0000974401 Hymenolepis nana HNAJ_0000974401 N 0.464
T265_14643 Opisthorchis viverrini T265_14643 N 0.464
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.463
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.463
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.463
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N 0.463
CapteG158220 Capitella teleta CapteG158220 N 0.461
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.461
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.461
SMU15002907 Schmidtea mediterranea SMU15002907 N 0.459
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.458
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.457
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.453
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.453
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.452
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.451
HmN_000813000 Hymenolepis microstoma HmN_000813000 N 0.449
ISCW017350 Ixodes scapularis ISCW017350 N 0.448
BGIBMGA001132 Bombyx mori BGIBMGA001132 N 0.447
Smp_100090 Schistosoma mansoni Smp_100090 N 0.447
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.447
ENSPMAG00000007397 Petromyzon marinus ENSPMAG00000007397 N 0.446
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.445
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N 0.444
HelroG157878 Helobdella robusta HelroG157878 N 0.444
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.442
T265_10726 Opisthorchis viverrini T265_10726 N 0.442
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.441
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N 0.441
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.440
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.440
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.440
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.440
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.440
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.440
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.440
ADIR000367 Anopheles dirus ADIR000367 N 0.440
PHUM006290 Pediculus humanus PHUM006290 N 0.439
hmgb1a Oryzias latipes ENSORLG00000003400 N 0.438
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.438
LotgiG200052 Lottia gigantea LotgiG200052 N 0.438
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.437
A_00070 Schistosoma haematobium A_00070 N 0.437
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.437
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.437
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.437
CBG17468 Caenorhabditis briggsae CBG17468 N 0.436
CBN17977 Caenorhabditis brenneri CBN17977 N 0.436
CJA09678 Caenorhabditis japonica CJA09678 N 0.436
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.436
MCOS_0000726501 Mesocestoides corti MCOS_0000726501 N 0.436
AAI68534 Xenopus tropicalis AAI68534 N 0.435
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.434
SMU15027649 Schmidtea mediterranea SMU15027649 N 0.434
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.433
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N 0.433
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.432
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.432
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.432
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.432
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.432
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.432
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.432
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.432
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.432
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.432
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.432
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.432
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.432
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.432
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.432
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.429
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N 0.429
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N 0.427
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N 0.427
hmgb1a Danio rerio ENSDARG00000099175 N 0.426
BAA06440 Xenopus laevis BAA06440 N 0.426
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N 0.425
ENSMEUG00000011289 Macropus eugenii ENSMEUG00000011289 N 0.425
AAH44009 Xenopus laevis AAH44009 N 0.425
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N 0.424
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N 0.424
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N 0.424
ENSSTOG00000007009 Ictidomys tridecemlineatus ENSSTOG00000007009 N 0.424
HelroG157726 Helobdella robusta HelroG157726 N 0.424
Smp_103530 Schistosoma mansoni Smp_103530 N 0.424
A_05510 Schistosoma haematobium A_05510 N 0.424
SCUD_0000067701 Schistosoma curassoni SCUD_0000067701 N 0.424
SMRZ_0000146101 Schistosoma margrebowiei SMRZ_0000146101 N 0.424
SMRZ_0001808901 Schistosoma margrebowiei SMRZ_0001808901 N 0.424
SROB_0001061001 Schistosoma rodhaini SROB_0001061001 N 0.424
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.422
hmgb1b Takifugu rubripes ENSTRUG00000004822 N 0.422
HelroG87827 Helobdella robusta HelroG87827 N 0.422
AAC59859 Xenopus laevis AAC59859 N 0.422
AAH73449 Xenopus laevis AAH73449 N 0.422
csin112095 Clonorchis sinensis csin112095 N 0.422
CRE02943 Caenorhabditis remanei CRE02943 N 0.421
hmgb2a Danio rerio ENSDARG00000029722 N 0.421
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N 0.421
DILT_0000548601 Diphyllobothrium latum DILT_0000548601 N 0.420
HMGB1 Bos taurus ENSBTAG00000014862 N 0.419
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N 0.419
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N 0.419
hmgb2b Oryzias latipes ENSORLG00000018687 N 0.419
ENSPFOG00000004794 Poecilia formosa ENSPFOG00000004794 N 0.419
hmgb2b Tetraodon nigroviridis ENSTNIG00000004824 N 0.419
hmgb2b Takifugu rubripes ENSTRUG00000005015 N 0.419
ENSXMAG00000011106 Xiphophorus maculatus ENSXMAG00000011106 N 0.419
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N 0.418
ENSOGAG00000029272 Otolemur garnettii ENSOGAG00000029272 N 0.417
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.417
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N 0.416
ENSOGAG00000010941 Otolemur garnettii ENSOGAG00000010941 N 0.415
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N 0.415