SMU15030256 (Schmidtea mediterranea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SMU15030256 T335029_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15030256 Sox 11 81
SMU15030256 Sox 102 168

Links

Other Sox family TFs
Other Schmidtea mediterranea TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Smp_000980 Schistosoma mansoni Smp_000980 N 0.600
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.600
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.600
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.600
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.592
TsM_000115400 Taenia solium TsM_000115400 N 0.592
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.589
T265_12733 Opisthorchis viverrini T265_12733 N 0.584
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.582
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.578
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.571
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.571
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.569
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.569
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.556
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.556
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.556
D915_00818 Fasciola hepatica D915_00818 N 0.544
HelroG157878 Helobdella robusta HelroG157878 N 0.536
HelroG87827 Helobdella robusta HelroG87827 N 0.513
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.513
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.511
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.498
ISCW017350 Ixodes scapularis ISCW017350 N 0.498
SMAR013695 Strigamia maritima SMAR013695 N 0.495
D915_15256 Fasciola hepatica D915_15256 N 0.495
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N 0.492
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.492
csin110255 Clonorchis sinensis csin110255 N 0.492
T265_14643 Opisthorchis viverrini T265_14643 N 0.492
MDOA008812 Musca domestica MDOA008812 N 0.490
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.489
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.489
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.484
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.481
AAEL011380 Aedes aegypti AAEL011380 N 0.478
ADAC001494 Anopheles darlingi ADAC001494 N 0.478
AGAP000005 Anopheles gambiae AGAP000005 N 0.478
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.478
AALB006743 Anopheles albimanus AALB006743 N 0.478
AARA010318 Anopheles arabiensis AARA010318 N 0.478
AATE018776 Anopheles atroparvus AATE018776 N 0.478
ACUA021022 Anopheles culicifacies ACUA021022 N 0.478
ADIR011701 Anopheles dirus ADIR011701 N 0.478
AEPI002924 Anopheles epiroticus AEPI002924 N 0.478
AFAF003948 Anopheles farauti AFAF003948 N 0.478
AFUN010134 Anopheles funestus AFUN010134 N 0.478
AMAM015540 Anopheles maculatus AMAM015540 N 0.478
AMEC021909 Anopheles melas AMEC021909 N 0.478
AMEM017336 Anopheles merus AMEM017336 N 0.478
AMIN005344 Anopheles minimus AMIN005344 N 0.478
ASIS000124 Anopheles sinensis ASIS000124 N 0.478
hmgb1a Danio rerio ENSDARG00000099175 N 0.476
Dsp1 Drosophila melanogaster FBgn0011764 N 0.476
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.476
GF19115 Drosophila ananassae FBgn0096126 N 0.476
GG17955 Drosophila erecta FBgn0110175 N 0.476
GH12282 Drosophila grimshawi FBgn0119761 N 0.476
GI10980 Drosophila mojavensis FBgn0133743 N 0.476
GD17278 Drosophila simulans FBgn0188840 N 0.476
GJ19445 Drosophila virilis FBgn0206588 N 0.476
GK25058 Drosophila willistoni FBgn0227017 N 0.476
GE17263 Drosophila yakuba FBgn0234741 N 0.476
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.476
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.476
LCUP007363 Lucilia cuprina LCUP007363 N 0.476
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N 0.475
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.475
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.475
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.475
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.474
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N 0.472
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.472
hmgb1a Oryzias latipes ENSORLG00000003400 N 0.471
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.471
SMU15002907 Schmidtea mediterranea SMU15002907 N 0.471
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.470
Smp_103530 Schistosoma mansoni Smp_103530 N 0.469
A_05510 Schistosoma haematobium A_05510 N 0.469
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.469
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.469
SCUD_0000067701 Schistosoma curassoni SCUD_0000067701 N 0.469
SMRZ_0000146101 Schistosoma margrebowiei SMRZ_0000146101 N 0.469
SMRZ_0001808901 Schistosoma margrebowiei SMRZ_0001808901 N 0.469
SROB_0001061001 Schistosoma rodhaini SROB_0001061001 N 0.469
HNAJ_0000974401 Hymenolepis nana HNAJ_0000974401 N 0.468
RSKR_0000605700 Rhabditophanes kr3021 RSKR_0000605700 N 0.468
CapteG158220 Capitella teleta CapteG158220 N 0.467
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.467
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.467
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.467
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.467
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.467
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.467
TRE_0000506801 Trichobilharzia regenti TRE_0000506801 N 0.467
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.466
HDID_0000408601 Hymenolepis diminuta HDID_0000408601 N 0.466
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N 0.465
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.465
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.465
BAA06440 Xenopus laevis BAA06440 N 0.464
HmN_000813000 Hymenolepis microstoma HmN_000813000 N 0.464
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.463
SMU15030485 Schmidtea mediterranea SMU15030485 N 0.463
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.461
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.461
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.461
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.461
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.461
ENSPMAG00000007397 Petromyzon marinus ENSPMAG00000007397 N 0.459
ACEP16613 Atta cephalotes ACEP16613 N 0.458
NV15664 Nasonia vitripennis NV15664 N 0.458
SINV22586 Solenopsis invicta SINV22586 N 0.458
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.458
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.458
BGLB010942 Biomphalaria glabrata BGLB010942 N 0.456
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.455
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.455
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.453
AAI68534 Xenopus tropicalis AAI68534 N 0.452
SMU15029809 Schmidtea mediterranea SMU15029809 N 0.452
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.451
LotgiG200052 Lottia gigantea LotgiG200052 N 0.451
PHUM006290 Pediculus humanus PHUM006290 N 0.450
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.450
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.449
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N 0.448
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N 0.447
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N 0.447
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.446
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.444
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.444
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.444
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.444
NECAME_09126 Necator americanus NECAME_09126 N 0.444
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.444
ASIS009950 Anopheles sinensis ASIS009950 N 0.442
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.441
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.441
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.441
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.441
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.441
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.441
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.441
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.441
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.441
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.441
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.441
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.441
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.441
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.441
hmgb1b Takifugu rubripes ENSTRUG00000004822 N 0.440
hmgb2a Danio rerio ENSDARG00000029722 N 0.439
AAC59859 Xenopus laevis AAC59859 N 0.439
AAH73449 Xenopus laevis AAH73449 N 0.439
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.439
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.439
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.438
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N 0.438
ENSPFOG00000004794 Poecilia formosa ENSPFOG00000004794 N 0.438
ENSXMAG00000011106 Xiphophorus maculatus ENSXMAG00000011106 N 0.438
D918_07195 Trichuris suis D918_07195 N 0.437
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.437
Aqu1.227714 Amphimedon queenslandica Aqu1.227714 N 0.436
BGIBMGA001132 Bombyx mori BGIBMGA001132 N 0.436
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N 0.435
hmgb2b Oryzias latipes ENSORLG00000018687 N 0.435
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.435
hmgb2b Tetraodon nigroviridis ENSTNIG00000004824 N 0.435
hmgb2b Takifugu rubripes ENSTRUG00000005015 N 0.435
AATE010886 Anopheles atroparvus AATE010886 N 0.435
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N 0.434
hmgb2b Gasterosteus aculeatus ENSGACG00000001173 N 0.434
HMEL007340 Heliconius melpomene HMEL007340 N 0.434
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.434
T265_10726 Opisthorchis viverrini T265_10726 N 0.434
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.431
MCOS_0000726501 Mesocestoides corti MCOS_0000726501 N 0.431
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.431
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N 0.430
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N 0.430
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N 0.430
ENSCAFG00000023930 Canis familiaris ENSCAFG00000023930 N 0.429
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N 0.429
csin112095 Clonorchis sinensis csin112095 N 0.429
HMGB1 Bos taurus ENSBTAG00000014862 N 0.428
Bm4180 Brugia malayi Bm4180 N 0.425
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N 0.425
LOAG_04936 Loa loa LOAG_04936 N 0.425
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.425
ASU_03902 Ascaris suum ASU_03902 N 0.425
D917_08189 Trichinella nativa D917_08189 N 0.425
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.425
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.425
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.425
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.425
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.425
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.425
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.425
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.425
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.425
ENSTBEG00000016187 Tupaia belangeri ENSTBEG00000016187 N 0.424
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N 0.424
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.423
EFV57410 Trichinella spiralis EFV57410 N 0.422
ENSECAG00000003655 Equus caballus ENSECAG00000003655 N 0.422
ENSGMOG00000010657 Gadus morhua ENSGMOG00000010657 N 0.422
D917_01254 Trichinella nativa D917_01254 N 0.422
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.422
L889_g13533 Steinernema feltiae L889_g13533 N 0.422
L892_g17551 Steinernema scapterisci L892_g17551 N 0.422
L893_g5947 Steinernema glaseri L893_g5947 N 0.422
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.422
BXY_1555400 Bursaphelenchus xylophilus BXY_1555400 N 0.421
DILT_0000548601 Diphyllobothrium latum DILT_0000548601 N 0.421
WUBG_12099 Wuchereria bancrofti WUBG_12099 N 0.420
EFV53345 Trichinella spiralis EFV53345 N 0.420
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.420
Smp_100090 Schistosoma mansoni Smp_100090 N 0.420
ANCCEY_10333 Ancylostoma ceylanicum ANCCEY_10333 N 0.420
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.420
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N 0.420
TsM_000088100 Taenia solium TsM_000088100 N 0.420
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N 0.419
CJA09678 Caenorhabditis japonica CJA09678 N 0.418
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.418
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.418
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.418
LOC108350839 Rattus norvegicus ENSRNOG00000038437 N 0.418
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.418
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.418
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N 0.418
ENSTBEG00000012989 Tupaia belangeri ENSTBEG00000012989 N 0.417
CBG17468 Caenorhabditis briggsae CBG17468 N 0.416
hmgb3b Danio rerio ENSDARG00000006408 N 0.415
ENSTBEG00000005874 Tupaia belangeri ENSTBEG00000005874 N 0.415
AAH44009 Xenopus laevis AAH44009 N 0.415