PMAA_043500 (Penicillium marneffei)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 PMAA_043500 T335314_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fmf-1
M02491_2.00 		Neurospora crassa
TCTTTGTY
RACAAAGA		 PBM
Weirauch et al.(2014)
pTH8941 		0.594 0.536
ste11
M11342_2.00 		Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW
WWDNDAACAAAGAAANWH		 Transfac
Matys et al.(2006)
F$STE11_01 		0.477 0.348
ste11
M11343_2.00 		Schizosaccharomyces pombe Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$STE11_02 		0.477 0.348
mat1-Mc
M11340_2.00 		Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN		 Transfac
Matys et al.(2006)
F$MAT1MC_01 		0.462 0.319
mat1-Mc
M11341_2.00 		Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR		 Transfac
Matys et al.(2006)
F$MAT1MC_02 		0.462 0.319
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PMAA_043500.t1 Sox 160 228

Links

Other Sox family TFs
Other Penicillium marneffei TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PMAA_043500 Talaromyces marneffei PMAA_043500 I 0.741
PV11_06959 Exophiala sideris PV11_06959 I 0.699
BDDG_02210 Blastomyces dermatitidis BDDG_02210 I 0.688
HCBG_03487 Histoplasma capsulatum HCBG_03487 I 0.688
HCBG_03538 Histoplasma capsulatum HCBG_03538 I 0.688
HMPREF1541_00526 Cyphellophora europaea HMPREF1541_00526 I 0.688
PVAR5_4317 Byssochlamys spectabilis PVAR5_4317 I 0.688
AOL_s00076g682 Arthrobotrys oligospora AOL_s00076g682 I 0.685
DRE_01366 Drechslerella stenobrocha DRE_01366 I 0.685
H072_3206 Dactylellina haptotyla H072_3206 I 0.685
GSTUM_00000587001 Tuber melanosporum GSTUM_00000587001 I 0.679
PV09_02982 Verruconis gallopava PV09_02982 I 0.679
UCRNP2_4825 Neofusicoccum parvum UCRNP2_4825 I 0.679
SNOG_06805 Stagonospora nodorum SNOG_06805 I 0.677
COCC4DRAFT_128466 Bipolaris maydis COCC4DRAFT_128466 I 0.677
COCCADRAFT_94527 Bipolaris zeicola COCCADRAFT_94527 I 0.677
COCMIDRAFT_89918 Bipolaris oryzae COCMIDRAFT_89918 I 0.677
COCSADRAFT_234458 Bipolaris sorokiniana COCSADRAFT_234458 I 0.677
COCVIDRAFT_36811 Bipolaris victoriae COCVIDRAFT_36811 I 0.677
LEMA_P053570.1 Leptosphaeria maculans LEMA_P053570.1 I 0.677
PTRG_00506 Pyrenophora triticirepentis PTRG_00506 I 0.677
PTT_17171 Pyrenophora teres PTT_17171 I 0.677
SETTUDRAFT_141783 Setosphaeria turcica SETTUDRAFT_141783 I 0.677
SNOG_06805 Phaeosphaeria nodorum SNOG_06805 I 0.677
estExt_fgenesh1_pg.C_60282 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_60282 I 0.677
CIMG_07042 Coccidioides immitis CIMG_07042 I 0.675
MCYG_01459 Microsporum canis MCYG_01459 I 0.675
ARB_03691 Arthroderma benhamiae ARB_03691 I 0.675
CPC735_033930 Coccidioides posadasii CPC735_033930 I 0.675
H101_05516 Trichophyton interdigitale H101_05516 I 0.675
H102_00913 Trichophyton rubrum H102_00913 I 0.675
H105_00920 Trichophyton soudanense H105_00920 I 0.675
MCYG_01459 Arthroderma otae MCYG_01459 I 0.675
MGYG_04614 Microsporum gypseum MGYG_04614 I 0.675
TESG_07204 Trichophyton tonsurans TESG_07204 I 0.675
TRV_02614 Trichophyton verrucosum TRV_02614 I 0.675
UREG_05828 Uncinocarpus reesii UREG_05828 I 0.675
PV08_03042 Exophiala spinifera PV08_03042 I 0.672
AB07429.1 Alternaria brassicicola AB07429.1 I 0.672
A1O9_08028 Exophiala aquamarina A1O9_08028 I 0.669
CGGC5_15243 Colletotrichum gloeosporioides CGGC5_15243 I 0.669
CH063_07887 Colletotrichum higginsianum CH063_07887 I 0.669
Cob_07979 Colletotrichum orbiculare Cob_07979 I 0.669
CSUB01_06308 Colletotrichum sublineola CSUB01_06308 I 0.669
GLRG_03847 Colletotrichum graminicola GLRG_03847 I 0.669
PV05_08438 Exophiala xenobiotica PV05_08438 I 0.669
SAPIO_CDS6811 Scedosporium apiospermum SAPIO_CDS6811 I 0.669
Z518_05535 Rhinocladiella mackenziei Z518_05535 I 0.669
Mycgr3G19556 Zymoseptoria tritici Mycgr3G19556 I 0.666
W97_06647 Coniosporium apollinis W97_06647 I 0.666
gw1.1.1805.1 Mycosphaerella graminicola gw1.1.1805.1 I 0.666
A1O1_06327 Capronia coronata A1O1_06327 I 0.663
A1O5_05497 Cladophialophora psammophila A1O5_05497 I 0.662
A1O7_06104 Cladophialophora yegresii A1O7_06104 I 0.662
G647_06434 Cladophialophora carrionii G647_06434 I 0.662
Z517_01278 Fonsecaea pedrosoi Z517_01278 I 0.662
Z519_03613 Cladophialophora bantiana Z519_03613 I 0.662
estExt_fgenesh1_pg.C_40373 Cryphonectria parasitica estExt_fgenesh1_pg.C_40373 I 0.662
CFIO01_08136 Colletotrichum fioriniae CFIO01_08136 I 0.661
NechaG74402 Fusarium solani NechaG74402 I 0.661
fgenesh1_pg.sca_1_chr1_3_0000013 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000013 I 0.661
GMDG_00488 Pseudogymnoascus destructans GMDG_00488 I 0.660
V499_02697 Pseudogymnoascus pannorum V499_02697 I 0.660
EURHEDRAFT_505813 Aspergillus ruber EURHEDRAFT_505813 I 0.658
A1O3_09986 Capronia epimyces A1O3_09986 I 0.656
HMPREF1120_03762 Exophiala dermatitidis HMPREF1120_03762 I 0.656
VDBG_05105 Verticillium albo atrum VDBG_05105 I 0.654
VDAG_08843 Verticillium dahliae VDAG_08843 I 0.654
VDBG_05105 Verticillium alfalfae VDBG_05105 I 0.654
ACLA_051410 Aspergillus clavatus CADACLAG00004834 I 0.652
AFUA_4G12410 Aspergillus fumigatus CADAFUAG00008054 I 0.652
NFIA_031140 Neosartorya fischeri CADNFIAG00002745 I 0.652
NFIA_103860 Neosartorya fischeri CADNFIAG00010220 I 0.652
PAAG_03088 Paracoccidioides sp lutzii PAAG_03088 I 0.652
PABG_00540 Paracoccidioides brasiliensis PABG_00540 I 0.652
fgenesh1_pg.00676_#_1 Aspergillus carbonarius fgenesh1_pg.00676_#_1 I 0.647
CADANGAG00000780 Aspergillus niger CADANGAG00000780 I 0.646
PCH_Pc22g05580 Penicillium rubens PCH_Pc22g05580 I 0.644
PDIP_85740 Penicillium digitatum PDIP_85740 I 0.644
PEX1_050910 Penicillium expansum PEX1_050910 I 0.644
PITC_067750 Penicillium italicum PITC_067750 I 0.644
U727_00431750231 Penicillium solitum U727_00431750231 I 0.644
Pc22g05580 Penicillium chrysogenum Pc22g05580 I 0.644
CHGG_02745 Chaetomium globosum CHGG_02745 I 0.641
MYCTH_2115094 Myceliophthora thermophila MYCTH_2115094 I 0.641
PODANS_1_13940 Podospora anserina PODANS_1_13940 I 0.641
THITE_2154193 Thielavia terrestris THITE_2154193 I 0.641
BGHDH14_bgh06642 Blumeria graminis BGHDH14_bgh06642 I 0.637
ANIA_03667 Aspergillus nidulans CADANIAG00005066 I 0.632
F503_06238 Ophiostoma piceae uamh F503_06238 I 0.628
ATEG_03127 Aspergillus terreus CADATEAG00008305 I 0.626
FFUJ_01566 Fusarium fujikuroi FFUJ_01566 I 0.626
FOXG_00011 Fusarium oxysporum FOXG_00011 I 0.626
FVEG_01504 Fusarium verticillioides FVEG_01504 I 0.626
CADAFLAG00011022 Aspergillus flavus CADAFLAG00011022 I 0.625
CADAORAG00003902 Aspergillus oryzae CADAORAG00003902 I 0.625
M437DRAFT_14409 Aureobasidium melanogenum M437DRAFT_14409 I 0.625
CMQ_6002 Grosmannia clavigera CMQ_6002 I 0.624
Bcin11g05790 Botrytis cinerea Bcin11g05790 I 0.623
MBM_05950 Marssonina brunnea MBM_05950 I 0.623
OIDMADRAFT_144579 Oidiodendron maius OIDMADRAFT_144579 I 0.623
SBOR_5980 Sclerotinia borealis SBOR_5980 I 0.623
SS1G_01161 Sclerotinia sclerotiorum SS1G_01161 I 0.623
TSTA_076640 Talaromyces stipitatus TSTA_076640 I 0.622
FGRRES_01366 Fusarium graminearum FGRRES_01366 I 0.620
FPSE_11538 Fusarium pseudograminearum FPSE_11538 I 0.620
AUEXF2481DRAFT_9186 Aureobasidium subglaciale AUEXF2481DRAFT_9186 I 0.616
M437DRAFT_59097 Aureobasidium melanogenum M437DRAFT_59097 I 0.616
M438DRAFT_356450 Aureobasidium pullulans M438DRAFT_356450 I 0.616
S40285_08558 Stachybotrys chlorohalonata S40285_08558 I 0.614
S40288_04059 Stachybotrys chartarum S40288_04059 I 0.614
CTHT_0010110 Chaetomium thermophilum CTHT_0010110 I 0.613
EPUS_01429 Endocarpon pusillum EPUS_01429 I 0.611
M7I_5540 Glarea lozoyensis M7I_5540 I 0.598
BBA_10247 Beauveria bassiana BBA_10247 I 0.596
NEUTE1DRAFT_126312 Neurospora tetrasperma NEUTE1DRAFT_126312 I 0.594
SMAC_04250 Sordaria macrospora SMAC_04250 I 0.594
aug-scaffold_2.g772 Neurospora discreta aug-scaffold_2.g772 I 0.594
fmf-1 Neurospora crassa NCU09387 D 0.594
HMPREF1624_06196 Sporothrix schenckii HMPREF1624_06196 I 0.591
SPBR_00669 Sporothrix brasiliensis SPBR_00669 I 0.591
SEPMUDRAFT_160654 Sphaerulina musiva SEPMUDRAFT_160654 I 0.590
GGTG_01301 Gaeumannomyces graminis GGTG_01301 I 0.585
DOTSEDRAFT_49782 Dothistroma septosporum DOTSEDRAFT_49782 I 0.584
MGG_05641 Magnaporthe oryzae MGG_05641 I 0.576
MAPG_06541 Magnaporthe poae MAPG_06541 I 0.572
TRIATDRAFT_28325 Trichoderma atroviride TRIATDRAFT_28325 I 0.567
EV44_g3421 Erysiphe necator EV44_g3421 I 0.562
TRIREDRAFT_34248 Trichoderma reesei TRIREDRAFT_34248 I 0.561
UCREL1_2263 Eutypa lata UCREL1_2263 I 0.557
AUEXF2481DRAFT_59185 Aureobasidium subglaciale AUEXF2481DRAFT_59185 I 0.555
PFICI_01201 Pestalotiopsis fici PFICI_01201 I 0.550
PDE_08506 Penicillium oxalicum PDE_08506 I 0.540
CCM_06680 Cordyceps militaris CCM_06680 I 0.538
HETIRDRAFT_244598 Heterobasidion irregulare HETIRDRAFT_244598 I 0.512
fgeneshPB_pg.2__774 Phycomyces blakesleeanus fgeneshPB_pg.2__774 I 0.512
gw1.1.1214.1 Heterobasidion annosum gw1.1.1214.1 I 0.512
PCH_Pc18g06680 Penicillium rubens PCH_Pc18g06680 I 0.507
Pc18g06680 Penicillium chrysogenum Pc18g06680 I 0.507
fgeneshMC_pg.3_#_1116 Mucor circinelloides fgeneshMC_pg.3_#_1116 I 0.504
fgeneshMC_pg.3_#_188 Mucor circinelloides fgeneshMC_pg.3_#_188 I 0.504
PTRG_11789 Pyrenophora triticirepentis PTRG_11789 I 0.495
fgeneshPB_pg.2__1074 Phycomyces blakesleeanus fgeneshPB_pg.2__1074 I 0.493
PTRG_10423 Pyrenophora triticirepentis PTRG_10423 I 0.492
SJAG_04009 Schizosaccharomyces japonicus SJAG_04009 I 0.487
YALI0_D22660g Yarrowia lipolytica YALI0_D22660g I 0.485
RO3G_12690 Rhizopus oryzae RO3G_12690 I 0.484
RO3G_10448 Rhizopus oryzae RO3G_10448 I 0.483
TRIVIDRAFT_19768 Trichoderma virens TRIVIDRAFT_19768 I 0.481
RO3G_12867 Rhizopus oryzae RO3G_12867 I 0.480
BAUCODRAFT_47482 Baudoinia compniacensis BAUCODRAFT_47482 I 0.480
SPOG_03188 Schizosaccharomyces cryophilus SPOG_03188 I 0.478
SOCG_01448 Schizosaccharomyces octosporus SOCG_01448 I 0.477
ste11 Schizosaccharomyces pombe SPBC32C12.02 D 0.477
MYCFIDRAFT_26717 Pseudocercospora fijiensis MYCFIDRAFT_26717 I 0.474
e_gw1.1.4496.1 Mycosphaerella fijiensis e_gw1.1.4496.1 I 0.474
FIBRA_03355 Fibroporia radiculosa FIBRA_03355 I 0.473
PNEG_02134 Pneumocystis murina PNEG_02134 I 0.473
PredSwiss_ASS2010_4380.1 Pneumocystis carinii PredSwiss_ASS2010_4380.1 I 0.473
PredSwiss_CON587.2 Pneumocystis carinii PredSwiss_CON587.2 I 0.473
PredSwiss_EST856.1 Pneumocystis carinii PredSwiss_EST856.1 I 0.473
EPUS_07645 Endocarpon pusillum EPUS_07645 I 0.471
PLEOSDRAFT_1081881 Pleurotus ostreatus PLEOSDRAFT_1081881 I 0.471
OCS_06292 Ophiocordyceps sinensis OCS_06292 I 0.462
mat3-Mc Schizosaccharomyces pombe SPBC1711.02 I 0.462
mat1-Mc Schizosaccharomyces pombe SPBC23G7.09 D 0.462
mat3-Mc Schizosaccharomyces pombe SPMTR.04 I 0.462
fgeneshMC_pg.6_#_618 Mucor circinelloides fgeneshMC_pg.6_#_618 I 0.457
fgeneshPB_pg.4__59 Phycomyces blakesleeanus fgeneshPB_pg.4__59 I 0.453
FOMPIDRAFT_1121239 Fomitopsis pinicola FOMPIDRAFT_1121239 N 0.452
M404DRAFT_22580 Pisolithus tinctorius M404DRAFT_22580 I 0.451
PISMIDRAFT_64161 Pisolithus microcarpus PISMIDRAFT_64161 I 0.451
SERLA73DRAFT_18439 Serpula lacrymans SERLA73DRAFT_18439 I 0.450
M413DRAFT_445326 Hebeloma cylindrosporum M413DRAFT_445326 I 0.449
fgeneshPB_pg.1__1053 Phycomyces blakesleeanus fgeneshPB_pg.1__1053 I 0.447
BN946_scf184829.g29 Trametes cinnabarina BN946_scf184829.g29 I 0.445
HETIRDRAFT_18754 Heterobasidion irregulare HETIRDRAFT_18754 I 0.444
PITC_063570 Penicillium italicum PITC_063570 I 0.444
U727_00429890111 Penicillium solitum U727_00429890111 I 0.444
gw1.15.231.1 Heterobasidion annosum gw1.15.231.1 I 0.444
CC1G_11980 Coprinopsis cinerea CC1G_11980 I 0.443
GLOTRDRAFT_140738 Gloeophyllum trabeum GLOTRDRAFT_140738 I 0.443
JAAARDRAFT_209377 Jaapia argillacea JAAARDRAFT_209377 I 0.443
AMAG_06979 Allomyces macrogynus AMAG_06979 I 0.442
Moror_2098 Moniliophthora roreri Moror_2098 I 0.442
MYCFIDRAFT_25002 Pseudocercospora fijiensis MYCFIDRAFT_25002 N 0.442
gw1.16.772.1 Mycosphaerella fijiensis gw1.16.772.1 N 0.442
JAAARDRAFT_93880 Jaapia argillacea JAAARDRAFT_93880 I 0.440
JAAARDRAFT_196285 Jaapia argillacea JAAARDRAFT_196285 I 0.439
EPUS_08057 Endocarpon pusillum EPUS_08057 I 0.437
PHLGIDRAFT_42639 Phlebiopsis gigantea PHLGIDRAFT_42639 N 0.437
BN946_scf184994.g56 Trametes cinnabarina BN946_scf184994.g56 I 0.436
GLOINDRAFT_50485 Rhizophagus irregularis GLOINDRAFT_50485 I 0.436
GLOINDRAFT_60750 Rhizophagus irregularis GLOINDRAFT_60750 I 0.436
GLOINDRAFT_81724 Rhizophagus irregularis GLOINDRAFT_81724 I 0.436
MYCTH_2129372 Myceliophthora thermophila MYCTH_2129372 I 0.435
fgeneshMC_pg.8_#_228 Mucor circinelloides fgeneshMC_pg.8_#_228 I 0.435
EFV52295 Trichinella spiralis EFV52295 I 0.434
DICSQDRAFT_32143 Dichomitus squalens DICSQDRAFT_32143 I 0.432
FOMPIDRAFT_1078602 Fomitopsis pinicola FOMPIDRAFT_1078602 I 0.432
CSUB01_02050 Colletotrichum sublineola CSUB01_02050 I 0.430
GLRG_04643 Colletotrichum graminicola GLRG_04643 I 0.430
Mycgr3G19569 Zymoseptoria tritici Mycgr3G19569 I 0.430
gw1.2.1019.1 Mycosphaerella graminicola gw1.2.1019.1 I 0.430
CC1G_10870 Coprinopsis cinerea CC1G_10870 I 0.428
CERSUDRAFT_118854 Ceriporiopsis subvermispora CERSUDRAFT_118854 I 0.428
Moror_16653 Moniliophthora roreri Moror_16653 I 0.427
PGTG_06975 Puccinia graminis PGTG_06975 I 0.426
BOTBODRAFT_190207 Botryobasidium botryosum BOTBODRAFT_190207 I 0.424
CFIO01_09392 Colletotrichum fioriniae CFIO01_09392 I 0.424
CH063_09403 Colletotrichum higginsianum CH063_09403 I 0.424
GLOINDRAFT_49297 Rhizophagus irregularis GLOINDRAFT_49297 I 0.422
HYDPIDRAFT_139999 Hydnomerulius pinastri HYDPIDRAFT_139999 I 0.422
M378DRAFT_459398 Amanita muscaria M378DRAFT_459398 I 0.422
PAXINDRAFT_15428 Paxillus involutus PAXINDRAFT_15428 I 0.422
PAXRUDRAFT_825171 Paxillus rubicundulus PAXRUDRAFT_825171 I 0.422
SCLCIDRAFT_74705 Scleroderma citrinum SCLCIDRAFT_74705 I 0.422
GALMADRAFT_246110 Galerina marginata GALMADRAFT_246110 I 0.420
NEUTE1DRAFT_103050 Neurospora tetrasperma NEUTE1DRAFT_103050 I 0.420
RO3G_10453 Rhizopus oryzae RO3G_10453 I 0.419
BN946_scf184994.g55 Trametes cinnabarina BN946_scf184994.g55 I 0.419
PLEOSDRAFT_1081807 Pleurotus ostreatus PLEOSDRAFT_1081807 I 0.419
FIBRA_04233 Fibroporia radiculosa FIBRA_04233 I 0.418
Moror_8177 Moniliophthora roreri Moror_8177 I 0.418
GALMADRAFT_255628 Galerina marginata GALMADRAFT_255628 N 0.417
M413DRAFT_449918 Hebeloma cylindrosporum M413DRAFT_449918 N 0.417
SCLCIDRAFT_6962 Scleroderma citrinum SCLCIDRAFT_6962 I 0.417
GLOINDRAFT_44333 Rhizophagus irregularis GLOINDRAFT_44333 I 0.416
GLOINDRAFT_204670 Rhizophagus irregularis GLOINDRAFT_204670 I 0.415
SETTUDRAFT_174840 Setosphaeria turcica SETTUDRAFT_174840 I 0.415