CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMAM008732
(
Anopheles maculatus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
AMAM008732
T335633_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pan
M06451_2.00
Drosophila melanogaster
DWYCAAAD
HTTTGRWH
B1H
Zhu et al.(2011)
pan_FlyReg_FBgn0085432
0.699
0.899
pan
M08428_2.00
Drosophila melanogaster
WHNAAAVRNRSCGM
KCGSYNYBTTTNDW
ChIP-chip
Mathelier et al.(2014)
MA0237.2
0.699
0.899
pan
M11337_2.00
Drosophila melanogaster
AAGATCAAAGG
CCTTTGATCTT
Transfac
Matys et al.(2006)
I$TCF_1
0.699
0.899
pan
M11338_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TCF_Q6
0.699
0.899
Tcf7l2
M00198_2.00
Mus musculus
NSWTCAAAVN
NBTTTGAWSN
PBM
Badis et al.(2009)
Tcf7l2_3461
0.679
0.841
Tcf7l2
M02646_2.00
Mus musculus
SATCAAAGN
NCTTTGATS
SELEX
Hallikas et al.(2006)
Tcf4
0.679
0.841
TCF7L2
M08167_2.00
Homo sapiens
NVASWTCAAAGVVN
NBBCTTTGAWSTBN
ChIP-seq
Mathelier et al.(2014)
MA0523.1
0.679
0.841
TCF7L2
M09393_2.00
Homo sapiens
DGCAGSTGKS
SMCASCTGCH
Misc
Kulakovskiy et al.(2013)
ITF2_HUMAN.H11MO.0.C
0.679
0.841
TCF7L2
M09394_2.00
Homo sapiens
VVASWTCAAAGVV
BBCTTTGAWSTBB
Misc
Kulakovskiy et al.(2013)
TF7L2_HUMAN.H11MO.0.A
0.679
0.841
Tcf7l2
M09401_2.00
Mus musculus
VVASWTCAAAGVV
BBCTTTGAWSTBB
Misc
Kulakovskiy et al.(2013)
TF7L2_MOUSE.H11MO.0.A
0.679
0.841
TCF7L2
M09638_2.00
Homo sapiens
CCTTTGAWST
ASWTCAAAGG
Misc
Heinz et al.(2010)
K562-TCF7L2_GSE29196
0.679
0.841
TCF7L2
M11316_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF4_Q5_01
0.679
0.841
TCF7L2
M11317_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF4_Q5_02
0.679
0.841
TCF7L2
M11318_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF4_Q5
0.679
0.841
TCF7L2
M11319_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF7L2_06
0.679
0.841
Lef1
M00200_2.00
Mus musculus
NSWTCAAAVN
NBTTTGAWSN
PBM
Badis et al.(2009)
Lef1_3504
0.679
0.826
LEF1
M03511_2.00
Homo sapiens
NRAGATCAAAGRVWW
WWBYCTTTGATCTYN
SELEX
Jolma et al.(2013)
LEF1_1
0.679
0.826
LEF1
M05771_2.00
Homo sapiens
NSATCAAAS
STTTGATSN
SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_1
0.679
0.826
LEF1
M05772_2.00
Homo sapiens
WCATCGRGRCGCTGW
WCAGCGYCYCGATGW
SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_2
0.679
0.826
LEF1
M05775_2.00
Homo sapiens
ASATCAAAG
CTTTGATST
SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_1
0.679
0.826
LEF1
M05776_2.00
Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_2
0.679
0.826
LEF1
M05895_2.00
Homo sapiens
WTCAAAGNNN
NNNCTTTGAW
SMiLE-seq
Isakova et al.(2017)
LEF1
0.679
0.826
LEF1
M09392_2.00
Homo sapiens
BSYTTTSWNNTBYH
DRVANNWSAAARSV
Misc
Kulakovskiy et al.(2013)
LEF1_HUMAN.H11MO.0.A
0.679
0.826
Lef1
M09402_2.00
Mus musculus
BSYTTTSWNNTBYH
DRVANNWSAAARSV
Misc
Kulakovskiy et al.(2013)
LEF1_MOUSE.H11MO.0.B
0.679
0.826
LEF1
M11311_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q2_01
0.679
0.826
LEF1
M11312_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q3
0.679
0.826
LEF1
M11313_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q4
0.679
0.826
LEF1
M11314_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q5_01
0.679
0.826
LEF1
M11315_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q5
0.679
0.826
LEF1
M05773_2.00
Homo sapiens
ASATCAAAG
CTTTGATST
SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_1
0.679
0.826
LEF1
M05774_2.00
Homo sapiens
WCATCGRGGCGCTGW
WCAGCGCCYCGATGW
SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_2
0.679
0.826
LEF1
M05777_2.00
Homo sapiens
ASATCAAAG
CTTTGATST
SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_1
0.679
0.826
LEF1
M05778_2.00
Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_2
0.679
0.826
Tcf7l1
M00207_2.00
Mus musculus
NNNNWWDN
NHWWNNNN
PBM
Badis et al.(2009)
Tcf3_3787
0.678
0.812
TCF7L1
M03512_2.00
Homo sapiens
AAAGATCAAAGG
CCTTTGATCTTT
SELEX
Jolma et al.(2013)
TCF7L1_1
0.678
0.812
TCF7L1
M05779_2.00
Homo sapiens
RSATCAAAG
CTTTGATSY
SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_1
0.678
0.812
TCF7L1
M05780_2.00
Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_2
0.678
0.812
TCF7L1
M09395_2.00
Homo sapiens
NBBCTTTGAWSTB
VASWTCAAAGVVN
Misc
Kulakovskiy et al.(2013)
TF7L1_HUMAN.H11MO.0.B
0.678
0.812
Tcf7l1
M09406_2.00
Mus musculus
BBCTTTGAWST
ASWTCAAAGVV
Misc
Kulakovskiy et al.(2013)
TF7L1_MOUSE.H11MO.0.A
0.678
0.812
Tcf7l1
M09407_2.00
Mus musculus
NDGCAGSTGBB
VVCASCTGCHN
Misc
Kulakovskiy et al.(2013)
TFE2_MOUSE.H11MO.0.A
0.678
0.812
TCF7L1
M11320_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF3_01
0.678
0.812
TCF7L1
M11321_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF3_Q6_01
0.678
0.812
TCF7L1
M11322_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF3_Q6
0.678
0.812
TCF7L1
M05781_2.00
Homo sapiens
CTTTGATSY
RSATCAAAG
SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_1
0.678
0.812
TCF7L1
M05782_2.00
Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_2
0.678
0.812
Tcf7
M00193_2.00
Mus musculus
HNHNNNNNN
NNNNNNDND
PBM
Badis et al.(2009)
Tcf7_0950
0.653
0.826
Tcf7
M03532_2.00
Mus musculus
AAASATCAAAGV
BCTTTGATSTTT
SELEX
Jolma et al.(2013)
Tcf7_1
0.653
0.826
TCF7
M05755_2.00
Homo sapiens
DSATCAAWS
SWTTGATSH
SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_1
0.653
0.826
TCF7
M05756_2.00
Homo sapiens
WCWKCGYCYCGWTGW
WCAWCGRGRCGMWGW
SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_2
0.653
0.826
TCF7
M05890_2.00
Homo sapiens
NNASATCAAASNN
NNSTTTGATSTNN
SMiLE-seq
Isakova et al.(2017)
TCF7
0.653
0.826
TCF7
M09386_2.00
Homo sapiens
NBBCTTTSAWSTBNBN
NVNVASWTSAAAGVVN
Misc
Kulakovskiy et al.(2013)
TCF7_HUMAN.H11MO.0.A
0.653
0.826
Tcf7
M09400_2.00
Mus musculus
VVRVADSAAARVVVNV
BNBBBYTTTSHTBYBB
Misc
Kulakovskiy et al.(2013)
TCF7_MOUSE.H11MO.0.A
0.653
0.826
TCF7
M11294_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF1_Q5_01
0.653
0.826
TCF7
M11295_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF1_Q5
0.653
0.826
TCF7
M05757_2.00
Homo sapiens
RSATCAAAS
STTTGATSY
SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_1
0.653
0.826
TCF7
M05758_2.00
Homo sapiens
WCAWCGRGRCGMWGW
WCWKCGYCYCGWTGW
SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_2
0.653
0.826
pop-1
M00712_2.00
Caenorhabditis elegans
NNHDWVNNNN
NNNNBWHDNN
PBM
Narasimhan et al.(2015)
pTH9135
0.484
0.464
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAM008732-PA
Sox
398
466
IKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHSLSRDEQSVYYDKARQERQLHMEMYPGWT
Links
Other
Sox
family TFs
Other
Anopheles maculatus
TFs
507 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy