CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
DICVIV_02621
(
Dictyocaulus viviparus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
DICVIV_02621
T336204_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DICVIV_02621
Sox
54
120
NSRPISAYAIFFKERQILIKKSSPKASFGEISRAVASEWELLDDEEKLKYKKKSEQIRNTHMKMAVK
Links
Other
Sox
family TFs
Other
Dictyocaulus viviparus
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NECAME_06830
Necator americanus
NECAME_06830
N
0.572
Hba_16915
Heterorhabditis bacteriophora
Hba_16915
I
0.520
CBN15844
Caenorhabditis brenneri
CBN15844
N
0.516
CRE28315
Caenorhabditis remanei
CRE28315
N
0.514
SBAD_0000070901
Soboliphyme baturini
SBAD_0000070901
I
0.513
L596_g21045
Steinernema carpocapsae
L596_g21045
I
0.501
L892_g13433
Steinernema scapterisci
L892_g13433
I
0.501
CJA17191
Caenorhabditis japonica
CJA17191
N
0.489
BGLB013626
Biomphalaria glabrata
BGLB013626
N
0.489
SNAPOd2T00002710001
Oikopleura dioica
SNAPOd2T00002710001
I
0.487
D918_06015
Trichuris suis
D918_06015
N
0.484
TMUE_s0227000300
Trichuris muris
TMUE_s0227000300
N
0.484
SVUK_0000686401
Strongylus vulgaris
SVUK_0000686401
N
0.481
CBG18873
Caenorhabditis briggsae
CBG18873
N
0.479
mgf006762m
Mimulus guttatus
mgf006762m
N
0.478
tetur31g00660
Tetranychus urticae
tetur31g00660
N
0.477
tetur31g00840
Tetranychus urticae
tetur31g00840
N
0.477
hmg-6
Caenorhabditis elegans
WBGene00009827
N
0.477
TELCIR_19210
Teladorsagia circumcincta
TELCIR_19210
N
0.476
TELCIR_25179
Teladorsagia circumcincta
TELCIR_25179
N
0.476
Sakowv30031460m.g
Saccoglossus kowalevskii
Sakowv30031460m.g
N
0.473
tetur31g01070
Tetranychus urticae
tetur31g01070
N
0.465
BTMF_0001006201
Brugia timori
BTMF_0001006201
I
0.464
EFV56090
Trichinella spiralis
EFV56090
N
0.462
D917_05046
Trichinella nativa
D917_05046
N
0.462
EFV56095
Trichinella spiralis
EFV56095
N
0.456
D917_05048
Trichinella nativa
D917_05048
N
0.456
TCM_014800
Theobroma cacao
TCM_014800
N
0.455
SMAR009325
Strigamia maritima
SMAR009325
N
0.453
EFV52201
Trichinella spiralis
EFV52201
N
0.449
pbrm1l
Danio rerio
ENSDARG00000077038
N
0.449
NBR_0000051501
Nippostrongylus brasiliensis
NBR_0000051501
N
0.449
D918_05288
Trichuris suis
D918_05288
N
0.448
TMUE_s0089001400
Trichuris muris
TMUE_s0089001400
N
0.448
PEQ_0000291001
Parascaris equorum
PEQ_0000291001
I
0.446
ACEP19638
Atta cephalotes
ACEP19638
I
0.444
HPBE_0002300401
Heligmosomoides bakeri
HPBE_0002300401
N
0.443
ISCW005293
Ixodes scapularis
ISCW005293
N
0.441
ASU_00939
Ascaris suum
ASU_00939
N
0.441
SMUV_0000135001
Syphacia muris
SMUV_0000135001
N
0.441
MhA1_Contig1224.frz3.gene1
Meloidogyne hapla
MhA1_Contig1224.frz3.gene1
N
0.438
BXY_0575000
Bursaphelenchus xylophilus
BXY_0575000
N
0.437
fgenesh2_pg.scaffold_1690000001
Branchiostoma floridae
fgenesh2_pg.scaffold_1690000001
N
0.433
ASIM_0001613301
Anisakis simplex
ASIM_0001613301
N
0.431
WUBG_00348
Wuchereria bancrofti
WUBG_00348
N
0.430
Bm2393
Brugia malayi
Bm2393
N
0.430
WBGene00238178
Onchocerca volvulus
WBGene00238178
N
0.430
nDi.2.2.2.g06671
Dirofilaria immitis
nDi.2.2.2.g06671
N
0.430
nDi.2.2.2.g10298
Dirofilaria immitis
nDi.2.2.2.g10298
N
0.430
nLs.2.1.2.g04689
Litomosoides sigmodontis
nLs.2.1.2.g04689
N
0.430
nLs.2.1.2.g08566
Litomosoides sigmodontis
nLs.2.1.2.g08566
N
0.430
nOo.2.0.1.g07918
Onchocerca ochengi
nOo.2.0.1.g07918
N
0.430
DME_0000632401
Dracunculus medinensis
DME_0000632401
N
0.424
CapteG221993
Capitella teleta
CapteG221993
N
0.421
ENSAMXG00000016832
Astyanax mexicanus
ENSAMXG00000016832
N
0.421
ENSPFOG00000017300
Poecilia formosa
ENSPFOG00000017300
N
0.421
pbrm1l
Tetraodon nigroviridis
ENSTNIG00000014731
N
0.421
pbrm1l
Takifugu rubripes
ENSTRUG00000005335
N
0.421
ENSXMAG00000016160
Xiphophorus maculatus
ENSXMAG00000016160
N
0.421
LOAG_15875
Loa loa
LOAG_15875
N
0.420
SPU_025140
Strongylocentrotus purpuratus
SPU_025140
N
0.420
WBGene00236865
Onchocerca volvulus
WBGene00236865
N
0.420
Minc18174
Meloidogyne incognita
Minc18174
N
0.420
genemark-nMf.1.1.scaf03789-processed-gene-0.2
Meloidogyne floridensis
genemark-nMf.1.1.scaf03789-processed-gene-0.2
N
0.420
GPUH_0001659301
Gongylonema pulchrum
GPUH_0001659301
N
0.420
nOo.2.0.1.g12207
Onchocerca ochengi
nOo.2.0.1.g12207
N
0.420
OFLC_0001222801
Onchocerca flexuosa
OFLC_0001222801
N
0.420
TCLT_0000189901
Thelazia callipaeda
TCLT_0000189901
N
0.420
gene21411-v1.0-hybrid
Fragaria vesca
gene21411-v1.0-hybrid
N
0.419
L798_00437
Zootermopsis nevadensis
L798_00437
N
0.418
PHUM393920
Pediculus humanus
PHUM393920
N
0.418