GPLIN_001054700 (Globodera pallida)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 GPLIN_001054700 T336350_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_001054700 Sox 69 100

Links

Other Sox family TFs
Other Globodera pallida TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N 0.519
LbrM.21.1660 Leishmania braziliensis LbrM.21.1660 N 0.501
OLONG_013579 Oryza longistaminata OLONG_013579 N 0.499
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.498
GLOINDRAFT_16424 Rhizophagus irregularis GLOINDRAFT_16424 N 0.486
M7I_1506 Glarea lozoyensis M7I_1506 N 0.486
GH17483 Drosophila grimshawi FBgn0124953 N 0.478
Ca_14341 Cicer arietinum Ca_14341 N 0.462
GA28914 Drosophila pseudoobscura FBgn0250273 N 0.459
EDI_065970 Entamoeba dispar EDI_065970 N 0.459
TVAG_468590 Trichomonas vaginalis TVAG_468590 N 0.452
PPA22145 Pristionchus pacificus PPA22145 N 0.451
CBN19486 Caenorhabditis brenneri CBN19486 N 0.450
EMIHUDRAFT_251194 Emiliania huxleyi EMIHUDRAFT_251194 N 0.449
PTTG_03070 Puccinia triticina PTTG_03070 N 0.449
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.440
SMU15030327 Schmidtea mediterranea SMU15030327 N 0.440
CGOC_0001370301 Cylicostephanus goldi CGOC_0001370301 N 0.438
EMIHUDRAFT_107556 Emiliania huxleyi EMIHUDRAFT_107556 N 0.435
SPU_021871 Strongylocentrotus purpuratus SPU_021871 N 0.435
ENSAPLG00000008530 Anas platyrhynchos ENSAPLG00000008530 N 0.425
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N 0.425
ENSGALG00000023601 Gallus gallus ENSGALG00000023601 N 0.425
ENSMGAG00000006336 Meleagris gallopavo ENSMGAG00000006336 N 0.425
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N 0.425
Aan_R006397 Calypte anna Aan_R006397 N 0.425
Afo_R011382 Aptenodytes forsteri Afo_R011382 N 0.425
Brh_R007868 Buceros rhinoceros Brh_R007868 N 0.425
Gfo_R008143 Geospiza fortis Gfo_R008143 N 0.425
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.424
fgenesh2_pg.scaffold_535000011 Branchiostoma floridae fgenesh2_pg.scaffold_535000011 N 0.423
EMIHUDRAFT_453575 Emiliania huxleyi EMIHUDRAFT_453575 N 0.422
GPLIN_001142900 Globodera pallida GPLIN_001142900 N 0.421
Sakowv30045438m.g Saccoglossus kowalevskii Sakowv30045438m.g N 0.419
ADIR005631 Anopheles dirus ADIR005631 N 0.419
F775_24487 Aegilops tauschii F775_24487 N 0.418
Traes_5DL_BCFE39D13 Triticum aestivum Traes_5DL_BCFE39D13 N 0.418
cassava14282.m1 Manihot esculenta cassava14282.m1 N 0.418
GLOINDRAFT_31865 Rhizophagus irregularis GLOINDRAFT_31865 N 0.417
CaO19.400 Candida albicans CaO19.400 N 0.416
CaO19.8030 Candida albicans CaO19.8030 N 0.416
DAPPUDRAFT_336128 Daphnia pulex DAPPUDRAFT_336128 N 0.416
DDB_G0287433 Dictyostelium discoideum DDB_G0287433 N 0.415
EMIHUDRAFT_468050 Emiliania huxleyi EMIHUDRAFT_468050 N 0.415