CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L898_g7743
(
Steinernema monticolum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
L898_g7743
T336588_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L898_g7743.t1
Sox
24
88
PKRAMSAFFIWLQENRANLKKPGMGVADVAKAAGLEWAKITDKSEWEKKASDDKKRYEEEMTAYK
Links
Other
Sox
family TFs
Other
Steinernema monticolum
TFs
209 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DREB1A
Oryza sativa
OS09G0522200
D
Q8GZQ2_MAIZE
Zea mays
Q8GZQ2_MAIZE
D
Sb05g006275
Sorghum bicolor
Sb05g006275
I
OPUNC09G15290
Oryza punctata
OPUNC09G15290
I
ORGLA08G0220100
Oryza glaberrima
ORGLA08G0220100
I
ORGLA09G0133100
Oryza glaberrima
ORGLA09G0133100
I
ORUFI09G18200
Oryza rufipogon
ORUFI09G18200
I
ORUFI09G18210
Oryza rufipogon
ORUFI09G18210
I
DREB1H
Oryza sativa
OS09G0522100
I
Sb02g030300
Sorghum bicolor
Sb02g030300
I
Sb02g030330
Sorghum bicolor
Sb02g030330
I
Sb02g030340
Sorghum bicolor
Sb02g030340
I
DREB1H
Oryza indica
BGIOSGA029416
I
Si030998m.g
Setaria italica
Si030998m.g
I
Si031001m.g
Setaria italica
Si031001m.g
I
Traes_5BL_D16B19610
Triticum aestivum
Traes_5BL_D16B19610
I
Pavir.Ba01280
Panicum virgatum
Pavir.Ba01280
I
Pavir.Ba01281
Panicum virgatum
Pavir.Ba01281
I
Pavir.Fb02246
Panicum virgatum
Pavir.Fb02246
I
Pavir.J03891
Panicum virgatum
Pavir.J03891
I
Pavir.J03892
Panicum virgatum
Pavir.J03892
I
Pavir.J03893
Panicum virgatum
Pavir.J03893
I
Pavir.J27101
Panicum virgatum
Pavir.J27101
I
OPUNC09G15260
Oryza punctata
OPUNC09G15260
I
DREB1A
Oryza indica
BGIOSGA029415
I
BRADI3G57360
Brachypodium distachyon
BRADI3G57360
I
BRADI4G35610
Brachypodium distachyon
BRADI4G35610
I
BRADI4G35650
Brachypodium distachyon
BRADI4G35650
I
F775_27111
Aegilops tauschii
F775_27111
I
GRMZM2G069082
Zea mays
GRMZM2G069082
I
GRMZM2G069126
Zea mays
GRMZM2G069126
I
GRMZM2G069146
Zea mays
GRMZM2G069146
I
GRMZM2G124011
Zea mays
GRMZM2G124011
I
GRMZM2G124037
Zea mays
GRMZM2G124037
I
LPERR09G12950
Leersia perrieri
LPERR09G12950
I
OPUNC09G15280
Oryza punctata
OPUNC09G15280
I
ONIVA09G17900
Oryza nivara
ONIVA09G17900
I
ONIVA09G17890
Oryza nivara
ONIVA09G17890
I
OMERI09G12490
Oryza meridionalis
OMERI09G12490
I
OMERI09G12480
Oryza meridionalis
OMERI09G12480
I
OGLUM09G17430
Oryza glumaepatula
OGLUM09G17430
I
OGLUM09G17420
Oryza glumaepatula
OGLUM09G17420
I
OBART09G16830
Oryza barthii
OBART09G16830
I
OBART09G16810
Oryza barthii
OBART09G16810
I
Traes_5BL_5299B6B33
Triticum aestivum
Traes_5BL_5299B6B33
N
Traes_5BL_0C3609EF0
Triticum aestivum
Traes_5BL_0C3609EF0
N
Pavir.Fa00114
Panicum virgatum
Pavir.Fa00114
N
F775_19112
Aegilops tauschii
F775_19112
N
Sb07g025210
Sorghum bicolor
Sb07g025210
N
GRMZM2G175856
Zea mays
GRMZM2G175856
N
Pavir.J32829
Panicum virgatum
Pavir.J32829
N