CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MCOS_0000670801
(
Mesocestoides corti
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
MCOS_0000670801
T336606_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Sox6
M00828_2.00
Mus musculus
WTTGTNNNN
NNNNACAAW
PBM
Weirauch et al.(2013)
pTH3862
0.444
0.449
SOX6
M05892_2.00
Homo sapiens
DRACAATRVN
NBYATTGTYH
SMiLE-seq
Isakova et al.(2017)
SOX6
0.444
0.449
Sox6
M08169_2.00
Mus musculus
BCWTTGTYYY
RRRACAAWGV
ChIP-seq
Mathelier et al.(2014)
MA0515.1
0.444
0.449
Sox6
M09640_2.00
Mus musculus
BHWTTGTBNN
NNVACAAWDV
Misc
Heinz et al.(2010)
Myotubes-Sox6_GSE32627
0.444
0.449
SOX6
M11300_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SOX6_Q5
0.444
0.449
mat1-Mc
M11340_2.00
Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN
Transfac
Matys et al.(2006)
F$MAT1MC_01
0.416
0.348
mat1-Mc
M11341_2.00
Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR
Transfac
Matys et al.(2006)
F$MAT1MC_02
0.416
0.348
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCOS_0000670801-mRNA-1
Sox
76
144
TPRPLNSFMIFAQHIRRNVLAIFEAASSSNVSRLLGEAWNSISKEVRAAYDEEAARLSKIHNIEFPTYK
Links
Other
Sox
family TFs
Other
Mesocestoides corti
TFs
211 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HmN_000208300
Hymenolepis microstoma
HmN_000208300
I
0.705
ECANG7_06280
Echinococcus canadensis
ECANG7_06280
I
0.699
EmuJ_000232900
Echinococcus multilocularis
EmuJ_000232900
I
0.699
TASK_0000873701
Taenia asiatica
TASK_0000873701
I
0.699
TsM_000714900
Taenia solium
TsM_000714900
I
0.699
HNAJ_0000300301
Hymenolepis nana
HNAJ_0000300301
I
0.698
TTAC_0000092501
Hydatigera taeniaeformis
TTAC_0000092501
I
0.694
DILT_0001026601
Diphyllobothrium latum
DILT_0001026601
I
0.613
SSLN_0000478001
Schistocephalus solidus
SSLN_0000478001
I
0.613
csin105999
Clonorchis sinensis
csin105999
I
0.606
T265_06704
Opisthorchis viverrini
T265_06704
I
0.606
SSLN_0000478501
Schistocephalus solidus
SSLN_0000478501
I
0.581
SMU15015648
Schmidtea mediterranea
SMU15015648
I
0.574
SMU15001429
Schmidtea mediterranea
SMU15001429
I
0.554
SMU15001430
Schmidtea mediterranea
SMU15001430
I
0.554
HDID_0000236901
Hymenolepis diminuta
HDID_0000236901
I
0.547
HmN_000874900
Hymenolepis microstoma
HmN_000874900
I
0.547
HNAJ_0001105001
Hymenolepis nana
HNAJ_0001105001
I
0.547
ECANG7_10853
Echinococcus canadensis
ECANG7_10853
I
0.543
TASK_0001001001
Taenia asiatica
TASK_0001001001
I
0.543
TsM_000188900
Taenia solium
TsM_000188900
I
0.543
TTAC_0000238201
Hydatigera taeniaeformis
TTAC_0000238201
I
0.543
Smp_076600
Schistosoma mansoni
Smp_076600
I
0.533
SMRZ_0000554201
Schistosoma margrebowiei
SMRZ_0000554201
I
0.533
ECANG7_01540
Echinococcus canadensis
ECANG7_01540
I
0.532
EmuJ_000437800
Echinococcus multilocularis
EmuJ_000437800
I
0.532
HmN_000494900
Hymenolepis microstoma
HmN_000494900
I
0.532
HNAJ_0000181101
Hymenolepis nana
HNAJ_0000181101
I
0.532
TASK_0000729701
Taenia asiatica
TASK_0000729701
I
0.532
TsM_000697900
Taenia solium
TsM_000697900
I
0.532
csin107154
Clonorchis sinensis
csin107154
I
0.525
T265_01843
Opisthorchis viverrini
T265_01843
I
0.525
SPER_0001384501
Spirometra erinaceieuropaei
SPER_0001384501
I
0.520
SSLN_0001637801
Schistocephalus solidus
SSLN_0001637801
I
0.520
KLTH0F13926g
Lachancea thermotolerans
KLTH0F13926g
I
0.481
KLTH0F13926g
Kluyveromyces thermotolerans
KLTH0F13926g
I
0.481
Kwal_21061
Kluyveromyces waltii
Kwal_21061
I
0.481
HETIRDRAFT_18754
Heterobasidion irregulare
HETIRDRAFT_18754
I
0.473
gw1.15.231.1
Heterobasidion annosum
gw1.15.231.1
I
0.473
AACERI_AaceriAAR026W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAAR026W
I
0.465
AGOS_AAR026W
Ashbya gossypii
AGOS_AAR026W
I
0.465
Ecym_1257
Eremothecium cymbalariae
Ecym_1257
I
0.465
A_00545
Schistosoma haematobium
A_00545
N
0.461
Sjc_0119940
Schistosoma japonicum
Sjc_0119940
N
0.455
SAKL0F03872g
Lachancea kluyveri
SAKL0F03872g
I
0.455
SCUD_0001126301
Schistosoma curassoni
SCUD_0001126301
N
0.455
SMRZ_0002061501
Schistosoma margrebowiei
SMRZ_0002061501
N
0.455
SMTD_0001685201
Schistosoma mattheei
SMTD_0001685201
N
0.455
SERLA73DRAFT_18439
Serpula lacrymans
SERLA73DRAFT_18439
I
0.452
GLOINDRAFT_47695
Rhizophagus irregularis
GLOINDRAFT_47695
I
0.451
SCLCIDRAFT_81131
Scleroderma citrinum
SCLCIDRAFT_81131
I
0.451
SCHCODRAFT_111770
Schizophyllum commune
SCHCODRAFT_111770
I
0.447
SCHCODRAFT_113446
Schizophyllum commune
SCHCODRAFT_113446
I
0.447
SCHCODRAFT_114945
Schizophyllum commune
SCHCODRAFT_114945
I
0.447
K443DRAFT_250430
Laccaria amethystina
K443DRAFT_250430
I
0.446
LACBIDRAFT_311738
Laccaria bicolor
LACBIDRAFT_311738
I
0.446
Mycgr3G19569
Zymoseptoria tritici
Mycgr3G19569
I
0.446
gw1.2.1019.1
Mycosphaerella graminicola
gw1.2.1019.1
I
0.446
D915_01276
Fasciola hepatica
D915_01276
N
0.446
ECPE_0001194001
Echinostoma caproni
ECPE_0001194001
N
0.446
SOX6
Anolis carolinensis
ENSACAG00000012782
I
0.444
ENSAMEG00000015112
Ailuropoda melanoleuca
ENSAMEG00000015112
I
0.444
ENSAMXG00000006474
Astyanax mexicanus
ENSAMXG00000006474
I
0.444
ENSAPLG00000008744
Anas platyrhynchos
ENSAPLG00000008744
I
0.444
SOX6
Bos taurus
ENSBTAG00000044185
I
0.444
SOX6
Canis familiaris
ENSCAFG00000008607
I
0.444
SOX6
Callithrix jacchus
ENSCJAG00000009643
I
0.444
SOX6
Cavia porcellus
ENSCPOG00000012090
I
0.444
ENSCSAG00000004751
Chlorocebus sabaeus
ENSCSAG00000004751
I
0.444
SOX6
Dasypus novemcinctus
ENSDNOG00000004344
I
0.444
SOX6
Equus caballus
ENSECAG00000010880
I
0.444
ENSFALG00000000798
Ficedula albicollis
ENSFALG00000000798
I
0.444
SOX6
Felis catus
ENSFCAG00000002214
I
0.444
SOX6
Homo sapiens
ENSG00000110693
D
0.444
SOX6
Gallus gallus
ENSGALG00000006074
I
0.444
SOX6
Gorilla gorilla
ENSGGOG00000010884
I
0.444
ENSGMOG00000009040
Gadus morhua
ENSGMOG00000009040
I
0.444
ENSLACG00000017676
Latimeria chalumnae
ENSLACG00000017676
I
0.444
ENSLOCG00000003065
Lepisosteus oculatus
ENSLOCG00000003065
I
0.444
ENSMEUG00000010268
Macropus eugenii
ENSMEUG00000010268
I
0.444
SOX6
Meleagris gallopavo
ENSMGAG00000006785
I
0.444
ENSMICG00000008914
Microcebus murinus
ENSMICG00000008914
I
0.444
SOX6
Myotis lucifugus
ENSMLUG00000007911
I
0.444
SOX6
Macaca mulatta
ENSMMUG00000002753
I
0.444
SOX6
Monodelphis domestica
ENSMODG00000007224
I
0.444
ENSMPUG00000013283
Mustela putorius furo
ENSMPUG00000013283
I
0.444
Sox6
Mus musculus
ENSMUSG00000051910
D
0.444
ENSNLEG00000017716
Nomascus leucogenys
ENSNLEG00000017716
I
0.444
SOX6
Ornithorhynchus anatinus
ENSOANG00000022345
I
0.444
ENSOARG00000005819
Ovis aries
ENSOARG00000005819
I
0.444
SOX6
Oryctolagus cuniculus
ENSOCUG00000012557
I
0.444
SOX6
Otolemur garnettii
ENSOGAG00000005358
I
0.444
SOX6
Ochotona princeps
ENSOPRG00000003350
I
0.444
sox6a
Oryzias latipes
ENSORLG00000001260
I
0.444
ENSPANG00000025558
Papio anubis
ENSPANG00000025558
I
0.444
ENSPPYG00000003459
Pongo abelii
ENSPPYG00000003459
I
0.444
ENSPSIG00000009027
Pelodiscus sinensis
ENSPSIG00000009027
I
0.444
SOX6
Pteropus vampyrus
ENSPVAG00000011735
I
0.444
Sox6
Rattus norvegicus
ENSRNOG00000020514
I
0.444
SOX6
Sorex araneus
ENSSARG00000011926
I
0.444
ENSSHAG00000006502
Sarcophilus harrisii
ENSSHAG00000006502
I
0.444
ENSSSCG00000030418
Sus scrofa
ENSSSCG00000030418
I
0.444
ENSSTOG00000013609
Ictidomys tridecemlineatus
ENSSTOG00000013609
I
0.444
SOX6
Taeniopygia guttata
ENSTGUG00000008522
I
0.444
ENSTSYG00000007395
Tarsius syrichta
ENSTSYG00000007395
I
0.444
SOX6
Tursiops truncatus
ENSTTRG00000003214
I
0.444
SOX6
Vicugna pacos
ENSVPAG00000003132
I
0.444
SCHCODRAFT_230584
Schizophyllum commune
SCHCODRAFT_230584
I
0.444
Aan_R006554
Calypte anna
Aan_R006554
I
0.444
Afo_R014568
Aptenodytes forsteri
Afo_R014568
I
0.444
Brh_R000892
Buceros rhinoceros
Brh_R000892
I
0.444
ENSP00000324948-D1
Bos grunniens
ENSP00000324948-D1
I
0.444
ENSP00000324948
Macaca fascicularis
ENSP00000324948
I
0.444
Gfo_R009095
Geospiza fortis
Gfo_R009095
I
0.444
Myotis_brandtii_PLEKHA7_10020549
Myotis brandtii
Myotis_brandtii_PLEKHA7_10020549
I
0.444
Ogr18873
Ophisaurus gracilis
Ogr18873
I
0.444
Pvit_16139
Pogona vitticeps
Pvit_16139
I
0.444
B1H349
Xenopus tropicalis
B1H349
I
0.444
sox6
Xenopus tropicalis
XB-GENE-483934
I
0.444
CAGL0D05434g
Candida glabrata
CAGL0D05434g
I
0.442
SCHCODRAFT_258194
Schizophyllum commune
SCHCODRAFT_258194
I
0.442
NDAI_0A05180
Naumovozyma dairenensis
NDAI_0A05180
I
0.440
XP_002160058.1
Hydra magnipapillata
XP_002160058.1
I
0.439
sox6
Danio rerio
ENSDARG00000015536
I
0.438
sox6
Gasterosteus aculeatus
ENSGACG00000006649
I
0.438
ENSONIG00000015539
Oreochromis niloticus
ENSONIG00000015539
I
0.438
ENSPFOG00000007860
Poecilia formosa
ENSPFOG00000007860
I
0.438
sox6
Takifugu rubripes
ENSTRUG00000014656
I
0.438
ENSXMAG00000012894
Xiphophorus maculatus
ENSXMAG00000012894
I
0.438
Smp_148110
Schistosoma mansoni
Smp_148110
I
0.438
DICSQDRAFT_32143
Dichomitus squalens
DICSQDRAFT_32143
I
0.437
K437DRAFT_265905
Tilletiaria anomala
K437DRAFT_265905
I
0.437
GLOTRDRAFT_28355
Gloeophyllum trabeum
GLOTRDRAFT_28355
I
0.436
JAAARDRAFT_33297
Jaapia argillacea
JAAARDRAFT_33297
I
0.435
BN946_scf184829.g29
Trametes cinnabarina
BN946_scf184829.g29
I
0.433
JAAARDRAFT_196285
Jaapia argillacea
JAAARDRAFT_196285
I
0.433
CANTEDRAFT_136140
Candida tenuis
CANTEDRAFT_136140
I
0.432
EFV52295
Trichinella spiralis
EFV52295
I
0.431
D917_04099
Trichinella nativa
D917_04099
I
0.431
Moror_16414
Moniliophthora roreri
Moror_16414
I
0.430
M404DRAFT_56218
Pisolithus tinctorius
M404DRAFT_56218
I
0.429
PAXRUDRAFT_414321
Paxillus rubicundulus
PAXRUDRAFT_414321
I
0.429
PISMIDRAFT_61859
Pisolithus microcarpus
PISMIDRAFT_61859
I
0.429
KAFR_0G02830
Kazachstania africana
KAFR_0G02830
I
0.427
SCHCODRAFT_238903
Schizophyllum commune
SCHCODRAFT_238903
I
0.427
GALMADRAFT_33159
Galerina marginata
GALMADRAFT_33159
I
0.426
SMAR001063
Strigamia maritima
SMAR001063
I
0.426
e_gw1.5.360.1
Cryphonectria parasitica
e_gw1.5.360.1
I
0.426
ANIA_03667
Aspergillus nidulans
CADANIAG00005066
I
0.425
DEHA2E09460g
Debaryomyces hansenii
DEHA2E09460g
I
0.425
SOX6
Pan troglodytes
ENSPTRG00000003393
I
0.425
GNLVRS01_PISO0K11912g
Millerozyma farinosa
GNLVRS01_PISO0K11912g
I
0.425
GNLVRS01_PISO0L11913g
Millerozyma farinosa
GNLVRS01_PISO0L11913g
I
0.425
LDEC020265
Leptinotarsa decemlineata
LDEC020265
N
0.424
RSKR_0000077800
Rhabditophanes kr3021
RSKR_0000077800
I
0.424
fgenesh1_pg.scaffold_41000062
Monosiga brevicollis
fgenesh1_pg.scaffold_41000062
I
0.423
SCLCIDRAFT_99844
Scleroderma citrinum
SCLCIDRAFT_99844
I
0.422
Kpol_1062p60
Vanderwaltozyma polyspora
Kpol_1062p60
I
0.421
NCAS_0E02010
Naumovozyma castellii
NCAS_0E02010
I
0.421
NDAI_0E03570
Naumovozyma dairenensis
NDAI_0E03570
I
0.421
TBLA_0J01680
Tetrapisispora blattae
TBLA_0J01680
I
0.421
Scas_Contig614.4
Saccharomyces castellii
Scas_Contig614.4
I
0.421
HelroG153549
Helobdella robusta
HelroG153549
I
0.420
CADANGAG00000780
Aspergillus niger
CADANGAG00000780
I
0.419
ZBAI_00389
Zygosaccharomyces bailii
ZBAI_00389
I
0.419
ZBAI_05541
Zygosaccharomyces bailii
ZBAI_05541
I
0.419
LELG_00108
Lodderomyces elongisporus
LELG_00108
I
0.418
Moror_4096
Moniliophthora roreri
Moror_4096
I
0.418
SOX13
Anolis carolinensis
ENSACAG00000010028
I
0.417
SOX13
Bos taurus
ENSBTAG00000008132
I
0.417
SOX13
Cavia porcellus
ENSCPOG00000006604
I
0.417
sox13
Danio rerio
ENSDARG00000030297
I
0.417
SOX13
Dasypus novemcinctus
ENSDNOG00000031131
I
0.417
ENSFALG00000000469
Ficedula albicollis
ENSFALG00000000469
I
0.417
sox13
Gasterosteus aculeatus
ENSGACG00000010931
I
0.417
ENSGMOG00000004316
Gadus morhua
ENSGMOG00000004316
I
0.417
ENSLACG00000008711
Latimeria chalumnae
ENSLACG00000008711
I
0.417
ENSLOCG00000000321
Lepisosteus oculatus
ENSLOCG00000000321
I
0.417
ENSOARG00000002079
Ovis aries
ENSOARG00000002079
I
0.417
SOX13
Oryctolagus cuniculus
ENSOCUG00000023464
I
0.417
ENSONIG00000006148
Oreochromis niloticus
ENSONIG00000006148
I
0.417
ENSONIG00000020233
Oreochromis niloticus
ENSONIG00000020233
I
0.417
sox6b
Oryzias latipes
ENSORLG00000006705
I
0.417
sox13
Oryzias latipes
ENSORLG00000012066
I
0.417
ENSPFOG00000004787
Poecilia formosa
ENSPFOG00000004787
I
0.417
ENSPFOG00000006435
Poecilia formosa
ENSPFOG00000006435
I
0.417
ENSPMAG00000007384
Petromyzon marinus
ENSPMAG00000007384
I
0.417
ENSTNIG00000004906
Tetraodon nigroviridis
ENSTNIG00000004906
I
0.417
sox13
Tetraodon nigroviridis
ENSTNIG00000007374
I
0.417
sox6
Tetraodon nigroviridis
ENSTNIG00000009384
I
0.417
sox13
Takifugu rubripes
ENSTRUG00000000156
I
0.417
sox6
Takifugu rubripes
ENSTRUG00000017299
I
0.417
ENSXMAG00000007070
Xiphophorus maculatus
ENSXMAG00000007070
I
0.417
ENSXMAG00000008855
Xiphophorus maculatus
ENSXMAG00000008855
I
0.417
Moror_2098
Moniliophthora roreri
Moror_2098
I
0.417
ENSP00000356174-D1
Bos grunniens
ENSP00000356174-D1
I
0.417
Gfo_R014696
Geospiza fortis
Gfo_R014696
I
0.417
Ogr06849
Ophisaurus gracilis
Ogr06849
I
0.417
Pvit_06069
Pogona vitticeps
Pvit_06069
I
0.417
fgenesh2_pg.scaffold_1022000007
Branchiostoma floridae
fgenesh2_pg.scaffold_1022000007
I
0.417
sox13
Xenopus tropicalis
XB-GENE-481889
I
0.417
sox13.S
Xenopus laevis
XB-GENE-865496
I
0.417
HDID_0000757301
Hymenolepis diminuta
HDID_0000757301
I
0.417
HmN_000097600
Hymenolepis microstoma
HmN_000097600
I
0.417
HNAJ_0000734901
Hymenolepis nana
HNAJ_0000734901
I
0.417
mat3-Mc
Schizosaccharomyces pombe
SPBC1711.02
I
0.416
mat1-Mc
Schizosaccharomyces pombe
SPBC23G7.09
D
0.416
mat3-Mc
Schizosaccharomyces pombe
SPMTR.04
I
0.416
A1O1_00170
Capronia coronata
A1O1_00170
I
0.415
A1O3_02036
Capronia epimyces
A1O3_02036
I
0.415
HMPREF1120_05727
Exophiala dermatitidis
HMPREF1120_05727
I
0.415