CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OESDEN_23252
(
Oesophagostomum dentatum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
OESDEN_23252
T336789_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OESDEN_23252
Sox
12
56
GCDQKSINIALAAEWQGLTDEERKPFLDLAIKERQQYEVELKAYE
Links
Other
Sox
family TFs
Other
Oesophagostomum dentatum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_20998
Ancylostoma duodenale
ANCDUO_20998
N
0.645
CC1G_07924
Coprinopsis cinerea
CC1G_07924
N
0.482
AALB009772
Anopheles albimanus
AALB009772
N
0.455
AWRI1499_3370
Brettanomyces bruxellensis
AWRI1499_3370
N
0.450
BN7_5034
Wickerhamomyces ciferrii
BN7_5034
N
0.448
SINV19749
Solenopsis invicta
SINV19749
N
0.445
PODANS_7_7190
Podospora anserina
PODANS_7_7190
N
0.438
LCUP001586
Lucilia cuprina
LCUP001586
N
0.436
CNM02020
Cryptococcus neoformans
CNM02020
N
0.434
MTR_6g048860
Medicago truncatula
MTR_6g048860
N
0.433
Thaps11061
Thalassiosira pseudonana
Thaps11061
N
0.431
Thapsdraft690
Thalassiosira pseudonana
Thapsdraft690
N
0.431
yakG000714
Bos grunniens
yakG000714
N
0.425
CaO19.1731
Candida albicans
CaO19.1731
N
0.423
CaO19.9299
Candida albicans
CaO19.9299
N
0.423
EMIHUDRAFT_108701
Emiliania huxleyi
EMIHUDRAFT_108701
N
0.423
HelroG167700
Helobdella robusta
HelroG167700
N
0.422
DDB_G0287073
Dictyostelium discoideum
DDB_G0287073
N
0.416
WUBG_10398
Wuchereria bancrofti
WUBG_10398
N
0.415
OESDEN_13068
Oesophagostomum dentatum
OESDEN_13068
N
0.398