RSKR_0000128800 (Rhabditophanes kr3021)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 RSKR_0000128800 T336853_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000128800.1 Sox 28 92

Links

Other Sox family TFs
Other Rhabditophanes kr3021 TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011425 Aedes aegypti AAEL011425 I 0.415
Bcin01g08840 Botrytis cinerea Bcin01g08840 I 0.462
CapteG172235 Capitella teleta CapteG172235 I 0.439
CBN25379 Caenorhabditis brenneri CBN25379 I 0.550
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.436
HmgZ Drosophila melanogaster FBgn0010228 I 0.427
HmgZ Drosophila yakuba FBgn0068145 I 0.427
GA14726 Drosophila pseudoobscura FBgn0074753 I 0.435
GF11622 Drosophila ananassae FBgn0088662 I 0.427
GG20749 Drosophila erecta FBgn0112936 I 0.427
GH20784 Drosophila grimshawi FBgn0128247 I 0.427
GI20867 Drosophila mojavensis FBgn0143601 I 0.427
GL17523 Drosophila persimilis FBgn0155126 I 0.435
GM15692 Drosophila sechellia FBgn0170608 I 0.427
GD25171 Drosophila simulans FBgn0196483 I 0.427
GJ20604 Drosophila virilis FBgn0207743 I 0.427
GK15658 Drosophila willistoni FBgn0217663 I 0.427
M7I_1578 Glarea lozoyensis M7I_1578 I 0.430
MBM_02410 Marssonina brunnea MBM_02410 I 0.430
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.472
PFL0145c Plasmodium falciparum PFL0145c I 0.417
SBOR_0403 Sclerotinia borealis SBOR_0403 I 0.430
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I 0.430
TriadG64155 Trichoplax adhaerens TriadG64155 I 0.445
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I 0.481
CLEC003860 Cimex lectularius CLEC003860 I 0.422
ETH_00031100 Eimeria tenella ETH_00031100 I 0.432
MDOA014797 Musca domestica MDOA014797 I 0.421
PPAI002522 Phlebotomus papatasi PPAI002522 I 0.444
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.630
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.649
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.649
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.649
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.649
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.649
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.576
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.566
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.535
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.464
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.544
WUBG_02390 Wuchereria bancrofti WUBG_02390 N 0.439
WUBG_03677 Wuchereria bancrofti WUBG_03677 N 0.469
Bm2524 Brugia malayi Bm2524 N 0.469
Bm6643 Brugia malayi Bm6643 N 0.506
Bm8632 Brugia malayi Bm8632 N 0.575
CBG04066 Caenorhabditis briggsae CBG04066 N 0.483
CBG09136 Caenorhabditis briggsae CBG09136 N 0.517
CJA04355 Caenorhabditis japonica CJA04355 N 0.546
CJA19030 Caenorhabditis japonica CJA19030 N 0.462
CRE03995 Caenorhabditis remanei CRE03995 N 0.472
CRE11852 Caenorhabditis remanei CRE11852 N 0.540
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.422
GI18750 Drosophila mojavensis FBgn0141489 N 0.421
GL11071 Drosophila persimilis FBgn0148681 N 0.422
GK22092 Drosophila willistoni FBgn0224077 N 0.430
LOAG_04347 Loa loa LOAG_04347 N 0.469
LOAG_08062 Loa loa LOAG_08062 N 0.575
LOAG_14354 Loa loa LOAG_14354 N 0.441
PPA02261 Pristionchus pacificus PPA02261 N 0.504
PPA06513 Pristionchus pacificus PPA06513 N 0.573
PPA14042 Pristionchus pacificus PPA14042 N 0.421
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.547
Smp_148930 Schistosoma mansoni Smp_148930 N 0.443
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.465
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.537
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.523
WBGene00237022 Onchocerca volvulus WBGene00237022 N 0.439
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.575
WBGene00244511 Onchocerca volvulus WBGene00244511 N 0.469
Sjc_0035580 Schistosoma japonicum Sjc_0035580 N 0.439
Minc03634 Meloidogyne incognita Minc03634 N 0.540
Minc04648 Meloidogyne incognita Minc04648 N 0.540
A_01848 Schistosoma haematobium A_01848 N 0.439
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.437
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.508
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.550
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.508
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.550
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.437
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.519
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.542
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.576
ALUE_0001798401 Ascaris lumbricoides ALUE_0001798401 N 0.425
ANCCAN_04253 Ancylostoma caninum ANCCAN_04253 N 0.553
ANCCAN_19939 Ancylostoma caninum ANCCAN_19939 N 0.469
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.561
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.508
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.561
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.541
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.561
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.508
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.490
ANCDUO_25675 Ancylostoma duodenale ANCDUO_25675 N 0.416
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.605
ASIM_0000114801 Anisakis simplex ASIM_0000114801 N 0.425
ASIM_0000156001 Anisakis simplex ASIM_0000156001 N 0.517
ASIM_0001147101 Anisakis simplex ASIM_0001147101 N 0.448
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.563
ASU_05752 Ascaris suum ASU_05752 N 0.542
ASU_05994 Ascaris suum ASU_05994 N 0.553
ASU_07820 Ascaris suum ASU_07820 N 0.576
ASU_09087 Ascaris suum ASU_09087 N 0.519
ASU_13985 Ascaris suum ASU_13985 N 0.425
BTMF_0000229601 Brugia timori BTMF_0000229601 N 0.439
csin108029 Clonorchis sinensis csin108029 N 0.433
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.561
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.508
DME_0000590001 Dracunculus medinensis DME_0000590001 N 0.462
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.540
ECANG7_00770 Echinococcus canadensis ECANG7_00770 N 0.446
ECPE_0001309901 Echinostoma caproni ECPE_0001309901 N 0.432
EEL_0000629001 Elaeophora elaphi EEL_0000629001 N 0.439
EEL_0000829801 Elaeophora elaphi EEL_0000829801 N 0.469
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N 0.446
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.507
EVEC_0000171701 Enterobius vermicularis EVEC_0000171701 N 0.513
GPUH_0000029001 Gongylonema pulchrum GPUH_0000029001 N 0.467
GPUH_0001272801 Gongylonema pulchrum GPUH_0001272801 N 0.469
GPUH_0001539601 Gongylonema pulchrum GPUH_0001539601 N 0.469
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.586
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.544
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.508
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.544
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.450
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.477
HPBE_0001796801 Heligmosomoides bakeri HPBE_0001796801 N 0.466
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.560
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.586
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.508
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.532
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.540
L596_g8199 Steinernema carpocapsae L596_g8199 N 0.484
L889_g16198 Steinernema feltiae L889_g16198 N 0.507
L889_g29516 Steinernema feltiae L889_g29516 N 0.598
L889_g6592 Steinernema feltiae L889_g6592 N 0.433
L889_g9094 Steinernema feltiae L889_g9094 N 0.538
L892_g19058 Steinernema scapterisci L892_g19058 N 0.540
L892_g23618 Steinernema scapterisci L892_g23618 N 0.534
L892_g2503 Steinernema scapterisci L892_g2503 N 0.484
L893_g23503 Steinernema glaseri L893_g23503 N 0.507
L893_g29974 Steinernema glaseri L893_g29974 N 0.540
L898_g23313 Steinernema monticolum L898_g23313 N 0.447
L898_g4830 Steinernema monticolum L898_g4830 N 0.540
L898_g7743 Steinernema monticolum L898_g7743 N 0.507
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.540
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.540
nAv.1.0.1.g03971 Acanthocheilonema viteae nAv.1.0.1.g03971 N 0.469
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.575
nAv.1.0.1.g09805 Acanthocheilonema viteae nAv.1.0.1.g09805 N 0.452
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.575
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.592
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.508
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.506
nDi.2.2.2.g07477 Dirofilaria immitis nDi.2.2.2.g07477 N 0.469
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.575
NECAME_10840 Necator americanus NECAME_10840 N 0.561
NECAME_16525 Necator americanus NECAME_16525 N 0.541
NECAME_17555 Necator americanus NECAME_17555 N 0.508
NECAME_17981 Necator americanus NECAME_17981 N 0.508
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.518
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.575
nLs.2.1.2.g07238 Litomosoides sigmodontis nLs.2.1.2.g07238 N 0.469
nOo.2.0.1.g01970 Onchocerca ochengi nOo.2.0.1.g01970 N 0.439
nOo.2.0.1.g02324 Onchocerca ochengi nOo.2.0.1.g02324 N 0.469
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.575
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.508
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N 0.439
OFLC_0000770701 Onchocerca flexuosa OFLC_0000770701 N 0.469
PTRK_0000111400 Parastrongyloides trichosuri PTRK_0000111400 N 0.449
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.595
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.476
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.623
RSKR_0000269500 Rhabditophanes kr3021 RSKR_0000269500 N 0.539
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.479
RSKR_0000733200 Rhabditophanes kr3021 RSKR_0000733200 N 0.450
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.619
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.547
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.547
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.504
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.573
SCUD_0000070901 Schistosoma curassoni SCUD_0000070901 N 0.439
SMTD_0001155301 Schistosoma mattheei SMTD_0001155301 N 0.439
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.506
SMUV_0000634201 Syphacia muris SMUV_0000634201 N 0.444
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.511
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.595
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N 0.449
SSLN_0000125101 Schistocephalus solidus SSLN_0000125101 N 0.429
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.595
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.443
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.511
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.511
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N 0.449
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.595
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.573
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.541
T265_15460 Opisthorchis viverrini T265_15460 N 0.433
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.446
TCLT_0000097001 Thelazia callipaeda TCLT_0000097001 N 0.428
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.519
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.553
TCNE_0001783901 Toxocara canis TCNE_0001783901 N 0.425
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.508
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.586
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.586
TsM_000111500 Taenia solium TsM_000111500 N 0.446
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.446