CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVUK_0000686401
(
Strongylus vulgaris
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SVUK_0000686401
T337077_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0000686401-mRNA-1
Sox
1
64
MFRPVSAYAMFFKERQMVVKKSFPEATFGDISRIVAGEWDSLGKEEKAAYKRRTDHLRKMQIEL
Links
Other
Sox
family TFs
Other
Strongylus vulgaris
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NECAME_06830
Necator americanus
NECAME_06830
N
0.643
TELCIR_19210
Teladorsagia circumcincta
TELCIR_19210
N
0.612
TELCIR_25179
Teladorsagia circumcincta
TELCIR_25179
N
0.612
NBR_0000051501
Nippostrongylus brasiliensis
NBR_0000051501
N
0.585
HPLM_0002008001
Haemonchus placei
HPLM_0002008001
N
0.559
SNAPOd2T00002710001
Oikopleura dioica
SNAPOd2T00002710001
I
0.557
Hba_16915
Heterorhabditis bacteriophora
Hba_16915
I
0.554
HPBE_0002300401
Heligmosomoides bakeri
HPBE_0002300401
N
0.553
CJA17191
Caenorhabditis japonica
CJA17191
N
0.544
CBN15844
Caenorhabditis brenneri
CBN15844
N
0.516
PEQ_0000291001
Parascaris equorum
PEQ_0000291001
I
0.503
SBAD_0000070901
Soboliphyme baturini
SBAD_0000070901
I
0.498
fgenesh2_pg.scaffold_1690000001
Branchiostoma floridae
fgenesh2_pg.scaffold_1690000001
N
0.483
CRE28315
Caenorhabditis remanei
CRE28315
N
0.482
DICVIV_02621
Dictyocaulus viviparus
DICVIV_02621
N
0.481
LOAG_15875
Loa loa
LOAG_15875
N
0.474
GPUH_0001659301
Gongylonema pulchrum
GPUH_0001659301
N
0.474
BXY_0575000
Bursaphelenchus xylophilus
BXY_0575000
N
0.471
PNEG_03347
Pneumocystis murina
PNEG_03347
I
0.470
ASIM_0001613301
Anisakis simplex
ASIM_0001613301
N
0.463
hmg-6
Caenorhabditis elegans
WBGene00009827
N
0.461
Sakowv30031460m.g
Saccoglossus kowalevskii
Sakowv30031460m.g
N
0.459
ASIM_0000224701
Anisakis simplex
ASIM_0000224701
N
0.454
ENSMMUP00000034886
Macaca fascicularis
ENSMMUP00000034886
N
0.453
L596_g21045
Steinernema carpocapsae
L596_g21045
I
0.448
L892_g13433
Steinernema scapterisci
L892_g13433
I
0.448
TOX2
Sorex araneus
ENSSARG00000001080
N
0.447
ENSTGUG00000014902
Taeniopygia guttata
ENSTGUG00000014902
N
0.447
ISCW005293
Ixodes scapularis
ISCW005293
N
0.445
ANCDUO_24180
Ancylostoma duodenale
ANCDUO_24180
N
0.442
Hsal_06265--XP_624018.2_APIME
Harpegnathos saltator
Hsal_06265--XP_624018.2_APIME
N
0.441
ALUE_0000699101
Ascaris lumbricoides
ALUE_0000699101
N
0.441
ASU_00726
Ascaris suum
ASU_00726
N
0.441
TCNE_0000652201
Toxocara canis
TCNE_0000652201
N
0.441
CGI_10018256
Crassostrea gigas
CGI_10018256
N
0.440
LotgiG144192
Lottia gigantea
LotgiG144192
N
0.439
tetur31g00660
Tetranychus urticae
tetur31g00660
N
0.439
tetur31g00840
Tetranychus urticae
tetur31g00840
N
0.439
tetur31g01070
Tetranychus urticae
tetur31g01070
N
0.439
tox2
Takifugu rubripes
ENSTRUG00000013848
N
0.438
ANCCAN_14841
Ancylostoma caninum
ANCCAN_14841
N
0.437
WUBG_00348
Wuchereria bancrofti
WUBG_00348
N
0.436
Bm2393
Brugia malayi
Bm2393
N
0.436
WBGene00238178
Onchocerca volvulus
WBGene00238178
N
0.436
nDi.2.2.2.g06671
Dirofilaria immitis
nDi.2.2.2.g06671
N
0.436
nDi.2.2.2.g10298
Dirofilaria immitis
nDi.2.2.2.g10298
N
0.436
nLs.2.1.2.g08566
Litomosoides sigmodontis
nLs.2.1.2.g08566
N
0.436
nOo.2.0.1.g07918
Onchocerca ochengi
nOo.2.0.1.g07918
N
0.436
TCLT_0000189901
Thelazia callipaeda
TCLT_0000189901
N
0.436
DME_0000632401
Dracunculus medinensis
DME_0000632401
N
0.435
LotgiG176647
Lottia gigantea
LotgiG176647
N
0.433
BGLB013626
Biomphalaria glabrata
BGLB013626
N
0.432
TCM_014800
Theobroma cacao
TCM_014800
N
0.431
PTRK_0001310900
Parastrongyloides trichosuri
PTRK_0001310900
N
0.430
SPAL_0001274100
Strongyloides papillosus
SPAL_0001274100
N
0.430
SSTP_0000878000
Strongyloides stercoralis
SSTP_0000878000
N
0.430
SVE_0827400
Strongyloides venezuelensis
SVE_0827400
N
0.430
TMUE_s0089001400
Trichuris muris
TMUE_s0089001400
N
0.430
SPU_025140
Strongylocentrotus purpuratus
SPU_025140
N
0.428
ENSAMXG00000016832
Astyanax mexicanus
ENSAMXG00000016832
N
0.427
pbrm1l
Danio rerio
ENSDARG00000077038
N
0.427
ENSPFOG00000017300
Poecilia formosa
ENSPFOG00000017300
N
0.427
ENSXMAG00000016160
Xiphophorus maculatus
ENSXMAG00000016160
N
0.427
mgf006762m
Mimulus guttatus
mgf006762m
N
0.427
ASU_00939
Ascaris suum
ASU_00939
N
0.426
SMUV_0000135001
Syphacia muris
SMUV_0000135001
N
0.426
Contig22304.0.g107
Oxytricha trifallax
Contig22304.0.g107
N
0.423
CBG18873
Caenorhabditis briggsae
CBG18873
N
0.418