SVUK_0000827101 (Strongylus vulgaris)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SVUK_0000827101 T337080_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0000827101-mRNA-1 Sox 7 64

Links

Other Sox family TFs
Other Strongylus vulgaris TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GPLIN_000847800 Globodera pallida GPLIN_000847800 N 0.565
D917_01243 Trichinella nativa D917_01243 N 0.559
D917_08464 Trichinella nativa D917_08464 N 0.559
BGLB013830 Biomphalaria glabrata BGLB013830 N 0.558
MCINX003696 Melitaea cinxia MCINX003696 N 0.549
DILT_0001977801 Diphyllobothrium latum DILT_0001977801 N 0.509
TTAC_0000838901 Hydatigera taeniaeformis TTAC_0000838901 N 0.507
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.477
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.477
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.477
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.477
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.477
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.477
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.477
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.477
NECAME_16117 Necator americanus NECAME_16117 N 0.477
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.477
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.477
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.477
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.477
EFA77534.1 Polysphondylium pallidum EFA77534.1 N 0.472
LCUP018488 Lucilia cuprina LCUP018488 N 0.471
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.471
MLOC_68913 Hordeum vulgare MLOC_68913 N 0.470
Traes_7AL_364A6E96F Triticum aestivum Traes_7AL_364A6E96F N 0.453
Traes_7BL_F45C15FA2 Triticum aestivum Traes_7BL_F45C15FA2 N 0.453
Traes_7DL_0CEFCB39D Triticum aestivum Traes_7DL_0CEFCB39D N 0.453
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.453
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.453
PDK_20s1781681g001 Phoenix dactylifera PDK_20s1781681g001 N 0.451
HelroG167700 Helobdella robusta HelroG167700 N 0.432
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.426
MDP0000242568 Malus domestica MDP0000242568 I 0.426
SBAD_0001127201 Soboliphyme baturini SBAD_0001127201 N 0.421
Gorai.011G042300 Gossypium raimondii Gorai.011G042300 N 0.419
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.415