CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTAC_0000194001
(
Hydatigera taeniaeformis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
TTAC_0000194001
T337244_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTAC_0000194001-mRNA-1
Sox
9
80
PRSPLSGFACFVQVIRDKHRSLHPNENVIFNEFAKSLFTALLKEMPPDKRAPFEEMSRLDTKRYNREMGEYV
TTAC_0000194001-mRNA-1
Sox
136
202
PKRALSAFFFFCDHYRSEVRNAHPEWRVSEVAKELGRLWDECSDKAPYELQAQKDKLRYEEEMRRYK
Links
Other
Sox
family TFs
Other
Hydatigera taeniaeformis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ECANG7_05481
Echinococcus canadensis
ECANG7_05481
N
0.711
EmuJ_000768300
Echinococcus multilocularis
EmuJ_000768300
N
0.711
TsM_000088100
Taenia solium
TsM_000088100
N
0.711
HmN_000813000
Hymenolepis microstoma
HmN_000813000
N
0.649
HDID_0000408601
Hymenolepis diminuta
HDID_0000408601
N
0.635
HNAJ_0000974401
Hymenolepis nana
HNAJ_0000974401
N
0.634
DILT_0000548601
Diphyllobothrium latum
DILT_0000548601
N
0.607
MCOS_0000726501
Mesocestoides corti
MCOS_0000726501
N
0.607
csin110255
Clonorchis sinensis
csin110255
N
0.487
D915_15256
Fasciola hepatica
D915_15256
N
0.487
T265_14643
Opisthorchis viverrini
T265_14643
N
0.487
Smp_103530
Schistosoma mansoni
Smp_103530
N
0.450
A_05510
Schistosoma haematobium
A_05510
N
0.450
SCUD_0000067701
Schistosoma curassoni
SCUD_0000067701
N
0.450
SMRZ_0000146101
Schistosoma margrebowiei
SMRZ_0000146101
N
0.450
SMRZ_0001808901
Schistosoma margrebowiei
SMRZ_0001808901
N
0.450
SROB_0001061001
Schistosoma rodhaini
SROB_0001061001
N
0.450
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
0.439
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
0.436
PXEA_0000566701
Protopolystoma xenopodis
PXEA_0000566701
N
0.436
TsM_000115400
Taenia solium
TsM_000115400
N
0.436
TRE_0000506801
Trichobilharzia regenti
TRE_0000506801
N
0.430
ECANG7_02036
Echinococcus canadensis
ECANG7_02036
N
0.416
TTAC_0000225801
Hydatigera taeniaeformis
TTAC_0000225801
N
0.416