CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTAC_0000838901
(
Hydatigera taeniaeformis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
TTAC_0000838901
T337251_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTAC_0000838901-mRNA-1
Sox
14
69
RVWEKVKNENPQLKLWEVGRIIGQMWRELPDEEKNIYIEEYEAEKQRYNDTLRQYH
Links
Other
Sox
family TFs
Other
Hydatigera taeniaeformis
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DILT_0001977801
Diphyllobothrium latum
DILT_0001977801
N
0.659
MCINX003696
Melitaea cinxia
MCINX003696
N
0.612
BGLB013830
Biomphalaria glabrata
BGLB013830
N
0.611
D917_01243
Trichinella nativa
D917_01243
N
0.532
D917_08464
Trichinella nativa
D917_08464
N
0.532
SVUK_0000827101
Strongylus vulgaris
SVUK_0000827101
N
0.507
Traes_7AL_364A6E96F
Triticum aestivum
Traes_7AL_364A6E96F
N
0.493
Traes_7DL_0CEFCB39D
Triticum aestivum
Traes_7DL_0CEFCB39D
N
0.493
SSLN_0001888901
Schistocephalus solidus
SSLN_0001888901
N
0.492
csin103376
Clonorchis sinensis
csin103376
N
0.490
LCUP018488
Lucilia cuprina
LCUP018488
N
0.488
Traes_7BL_F45C15FA2
Triticum aestivum
Traes_7BL_F45C15FA2
N
0.487
PDK_20s1781681g001
Phoenix dactylifera
PDK_20s1781681g001
N
0.487
ECANG7_05376
Echinococcus canadensis
ECANG7_05376
N
0.477
EmuJ_000113200
Echinococcus multilocularis
EmuJ_000113200
N
0.477
TASK_0000875901
Taenia asiatica
TASK_0000875901
N
0.477
TsM_000047400
Taenia solium
TsM_000047400
N
0.477
GPLIN_000847800
Globodera pallida
GPLIN_000847800
N
0.475
Gorai.002G115100
Gossypium raimondii
Gorai.002G115100
I
0.468
orange1.1g031906m.g
Citrus sinensis
orange1.1g031906m.g
I
0.468
HDID_0000207001
Hymenolepis diminuta
HDID_0000207001
N
0.468
SBAD_0001127201
Soboliphyme baturini
SBAD_0001127201
N
0.468
MDP0000242568
Malus domestica
MDP0000242568
I
0.464
MCOS_0000928101
Mesocestoides corti
MCOS_0000928101
N
0.462
SMU15005679
Schmidtea mediterranea
SMU15005679
N
0.436
SMU15025606
Schmidtea mediterranea
SMU15025606
N
0.436
LotgiG111061
Lottia gigantea
LotgiG111061
N
0.435
ENSCJAG00000006608
Callithrix jacchus
ENSCJAG00000006608
N
0.429
Traes_3DL_21C50DDF5
Triticum aestivum
Traes_3DL_21C50DDF5
N
0.429
HmN_000301900
Hymenolepis microstoma
HmN_000301900
N
0.429
PXEA_0001727801
Protopolystoma xenopodis
PXEA_0001727801
N
0.428
Smp_154640
Schistosoma mansoni
Smp_154640
N
0.421
Sjc_0000110
Schistosoma japonicum
Sjc_0000110
N
0.421
A_05744
Schistosoma haematobium
A_05744
N
0.421
D915_15883
Fasciola hepatica
D915_15883
N
0.421
SCUD_0000923501
Schistosoma curassoni
SCUD_0000923501
N
0.421
SMTD_0000014601
Schistosoma mattheei
SMTD_0000014601
N
0.421
SROB_0000607501
Schistosoma rodhaini
SROB_0000607501
N
0.421
T265_02983
Opisthorchis viverrini
T265_02983
N
0.421
MLOC_68913
Hordeum vulgare
MLOC_68913
N
0.418
SMARCE1
Gasterosteus aculeatus
ENSGACG00000018114
N
0.416
HelroG167700
Helobdella robusta
HelroG167700
N
0.416
gw1.88.46.1
Fragilariopsis cylindrus
gw1.88.46.1
N
0.416