ENSAMXG00000009990 (Astyanax mexicanus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSAMXG00000009990 T339625_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbr1
M01028_2.00 		Mus musculus
DTVRCAMNYH
DRNKTGYBAH		 PBM
SebePedros et al.(2013)
pTH2659 		0.908 0.978
TBR1
M03560_2.00 		Homo sapiens
AGGTGTGAAN
NTTCACACCT		 SELEX
Jolma et al.(2013)
TBR1_1 		0.908 0.978
TBR1
M03561_2.00 		Homo sapiens
RAGGTGTGAAH
DTTCACACCTY		 SELEX
Jolma et al.(2013)
TBR1_2 		0.908 0.978
Eomes
M00215_2.00 		Mus musculus
RDGTGYBANN
NNTVRCACHY		 PBM
Badis et al.(2009)
Eomes_0921 		0.853 0.858
EOMES
M03563_2.00 		Homo sapiens
DAGGTGTGAWNNN
NNNWTCACACCTH		 SELEX
Jolma et al.(2013)
EOMES_1 		0.853 0.852
EOMES
M03564_2.00 		Homo sapiens
TVACACNTNNNDRNGTGTGA
TCACACNYHNNNANGTGTBA		 SELEX
Jolma et al.(2013)
EOMES_2 		0.853 0.852
EOMES
M02752_2.00 		Homo sapiens
AGGTGTGAW
WTCACACCT		 SELEX
Jolma et al.(2010)
EOMES_monomer 		0.853 0.852
EOMES
M05807_2.00 		Homo sapiens
DAGGTGTGAN
NTCACACCTH		 SELEX
Yin et al.(2017)
EOMES_eDBD_HT-SELEX 		0.853 0.852
EOMES
M09647_2.00 		Homo sapiens
ARGTGWKAAN
NTTMWCACYT		 Misc
Heinz et al.(2010)
H9-Eomes_GSE26097 		0.853 0.852
EOMES
M05808_2.00 		Homo sapiens
NABGTGYKAH
DTMRCACVTN		 SELEX
Yin et al.(2017)
EOMES_eDBD_Methyl-HT-SELEX 		0.853 0.852
A0A075Q982_PATMI
M00734_2.00 		Patiria miniata
NAGGTGTBAN
NTVACACCTN		 PBM
Cheatle-Jarvela et al.(2014)
PmTbr 		0.789 0.645
TBX21
M03546_2.00 		Homo sapiens
GGTGTGAHDTMACACY
RGTGTKAHDTCACACC		 SELEX
Jolma et al.(2013)
TBX21_1 		0.763 0.721
TBX21
M03547_2.00 		Homo sapiens
DAGGTGTGAW
WTCACACCTH		 SELEX
Jolma et al.(2013)
TBX21_2 		0.763 0.721
TBX21
M03548_2.00 		Homo sapiens
TMACACYTNNDAGGTGTGA
TCACACCTHNNARGTGTKA		 SELEX
Jolma et al.(2013)
TBX21_3 		0.763 0.721
TBX21
M03549_2.00 		Homo sapiens
GGTGTGAWATCACACC
GGTGTGATWTCACACC		 SELEX
Jolma et al.(2013)
TBX21_4 		0.763 0.721
TBX21
M03550_2.00 		Homo sapiens
DAGGTGTGAW
WTCACACCTH		 SELEX
Jolma et al.(2013)
TBX21_5 		0.763 0.721
TBX21
M03551_2.00 		Homo sapiens
TSACACCWNMRAGGTGTGA
TCACACCTYKNWGGTGTSA		 SELEX
Jolma et al.(2013)
TBX21_6 		0.763 0.721
TBX21
M05793_2.00 		Homo sapiens
DAGGTGTKAN
NTMACACCTH		 SELEX
Yin et al.(2017)
TBX21_eDBD_HT-SELEX 		0.763 0.721
TBX21
M09425_2.00 		Homo sapiens
NDSDRGSTGWBRN
NYVWCASCYHSHN		 Misc
Kulakovskiy et al.(2013)
TBX21_HUMAN.H11MO.0.A 		0.763 0.721
Tbx21
M09428_2.00 		Mus musculus
DNDDSTGWSDND
HNHSWCASHHNH		 Misc
Kulakovskiy et al.(2013)
TBX21_MOUSE.H11MO.0.A 		0.763 0.721
Tbx21
M09648_2.00 		Mus musculus
ADGTGWSAHN
NDTSWCACHT		 Misc
Heinz et al.(2010)
CD8-Tbet_GSE33802 		0.763 0.721
TBX21
M05794_2.00 		Homo sapiens
DASGTGTKAW
WTMACACSTH		 SELEX
Yin et al.(2017)
TBX21_eDBD_Methyl-HT-SELEX 		0.763 0.721
SPU_025584
M00733_2.00 		Strongylocentrotus purpuratus
RGGTGTGANN
NNTCACACCY		 PBM
Cheatle-Jarvela et al.(2014)
SpTbr 		0.759 0.612
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000010266 T-box 218 405

Links

Other T-box family TFs
Other Astyanax mexicanus TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
tbr1b Danio rerio ENSDARG00000004712 I 0.920
ENSLOCG00000008583 Lepisosteus oculatus ENSLOCG00000008583 I 0.918
tbr1b Gasterosteus aculeatus ENSGACG00000005648 I 0.909
ENSONIG00000008933 Oreochromis niloticus ENSONIG00000008933 I 0.909
tbr1b Oryzias latipes ENSORLG00000016828 I 0.909
ENSPFOG00000017461 Poecilia formosa ENSPFOG00000017461 I 0.909
ENSXMAG00000011427 Xiphophorus maculatus ENSXMAG00000011427 I 0.909
ENSAMEG00000012360 Ailuropoda melanoleuca ENSAMEG00000012360 I 0.908
TBR1 Bos taurus ENSBTAG00000021692 I 0.908
TBR1 Canis familiaris ENSCAFG00000009984 I 0.908
TBR1 Callithrix jacchus ENSCJAG00000005603 I 0.908
ENSCPOG00000005881 Cavia porcellus ENSCPOG00000005881 I 0.908
ENSCSAG00000015663 Chlorocebus sabaeus ENSCSAG00000015663 I 0.908
TBR1 Dasypus novemcinctus ENSDNOG00000009816 I 0.908
ENSFALG00000004466 Ficedula albicollis ENSFALG00000004466 I 0.908
TBR1 Homo sapiens ENSG00000136535 D 0.908
TBR1 Gorilla gorilla ENSGGOG00000015752 I 0.908
TBR1 Loxodonta africana ENSLAFG00000011541 I 0.908
TBR1 Macaca mulatta ENSMMUG00000011911 I 0.908
TBR1 Monodelphis domestica ENSMODG00000005353 I 0.908
ENSMPUG00000000551 Mustela putorius furo ENSMPUG00000000551 I 0.908
Tbr1 Mus musculus ENSMUSG00000035033 D 0.908
ENSNLEG00000002040 Nomascus leucogenys ENSNLEG00000002040 I 0.908
ENSOARG00000006620 Ovis aries ENSOARG00000006620 I 0.908
TBR1 Oryctolagus cuniculus ENSOCUG00000005884 I 0.908
TBR1 Otolemur garnettii ENSOGAG00000004936 I 0.908
ENSPANG00000018688 Papio anubis ENSPANG00000018688 I 0.908
ENSPPYG00000012882 Pongo abelii ENSPPYG00000012882 I 0.908
ENSPSIG00000004373 Pelodiscus sinensis ENSPSIG00000004373 I 0.908
TBR1 Pan troglodytes ENSPTRG00000012576 I 0.908
ENSSHAG00000016616 Sarcophilus harrisii ENSSHAG00000016616 I 0.908
ENSSTOG00000023843 Ictidomys tridecemlineatus ENSSTOG00000023843 I 0.908
TBR1 Tupaia belangeri ENSTBEG00000014183 I 0.908
ENSVPAG00000002720 Vicugna pacos ENSVPAG00000002720 I 0.908
ENSP00000374205 Macaca fascicularis ENSP00000374205 I 0.908
Pvit_15940 Pogona vitticeps Pvit_15940 I 0.908
tbr1 Xenopus tropicalis XB-GENE-942241 I 0.908
ENSLACG00000003893 Latimeria chalumnae ENSLACG00000003893 I 0.907
TBR1 Ochotona princeps ENSOPRG00000005150 I 0.907
TBR1 Felis catus ENSFCAG00000025073 I 0.906
ENSGMOG00000014981 Gadus morhua ENSGMOG00000014981 I 0.903
Alligator_sinensis_CCG012002.1 Alligator sinensis Alligator_sinensis_CCG012002.1 I 0.901
ENSP00000374205-D1 Bos grunniens ENSP00000374205-D1 I 0.901
Myotis_brandtii_SLC4A10_10035570 Myotis brandtii Myotis_brandtii_SLC4A10_10035570 I 0.901
TBR1 Myotis lucifugus ENSMLUG00000006008 I 0.897
tbr1b Takifugu rubripes ENSTRUG00000005183 I 0.888
ENSLOCG00000013335 Lepisosteus oculatus ENSLOCG00000013335 I 0.869
ENSONIG00000018223 Oreochromis niloticus ENSONIG00000018223 I 0.864
tbx21 Danio rerio ENSDARG00000004473 I 0.862
EOMES Anolis carolinensis ENSACAG00000014201 I 0.861
ENSAMXG00000010492 Astyanax mexicanus ENSAMXG00000010492 I 0.861
ENSFALG00000009181 Ficedula albicollis ENSFALG00000009181 I 0.861
EOMES Gallus gallus ENSGALG00000027247 I 0.861
ENSPSIG00000005360 Pelodiscus sinensis ENSPSIG00000005360 I 0.861
Ogr17175 Ophisaurus gracilis Ogr17175 I 0.861
eomes Xenopus tropicalis XB-GENE-479769 I 0.861
eomes.S Xenopus laevis XB-GENE-6487182 I 0.861
ENSLOCG00000002398 Lepisosteus oculatus ENSLOCG00000002398 I 0.860
ENSPFOG00000018019 Poecilia formosa ENSPFOG00000018019 I 0.858
tbx21 Tetraodon nigroviridis ENSTNIG00000010103 I 0.858
tbx21 Takifugu rubripes ENSTRUG00000012995 I 0.858
ENSXMAG00000013655 Xiphophorus maculatus ENSXMAG00000013655 I 0.858
ENSONIG00000007180 Oreochromis niloticus ENSONIG00000007180 I 0.857
eomesb Tetraodon nigroviridis ENSTNIG00000019116 I 0.857
ENSAMEG00000012731 Ailuropoda melanoleuca ENSAMEG00000012731 I 0.853
EOMES Bos taurus ENSBTAG00000016920 I 0.853
EOMES Canis familiaris ENSCAFG00000005510 I 0.853
EOMES Cavia porcellus ENSCPOG00000004381 I 0.853
Eomes Dipodomys ordii ENSDORG00000016346 I 0.853
EOMES Erinaceus europaeus ENSEEUG00000005958 I 0.853
EOMES Felis catus ENSFCAG00000003602 I 0.853
EOMES Homo sapiens ENSG00000163508 D 0.853
EOMES Gorilla gorilla ENSGGOG00000008358 I 0.853
EOMES Loxodonta africana ENSLAFG00000004142 I 0.853
ENSMICG00000015729 Microcebus murinus ENSMICG00000015729 I 0.853
ENSMMUG00000001904 Macaca mulatta ENSMMUG00000001904 I 0.853
ENSMPUG00000011981 Mustela putorius furo ENSMPUG00000011981 I 0.853
Eomes Mus musculus ENSMUSG00000032446 D 0.853
ENSNLEG00000004050 Nomascus leucogenys ENSNLEG00000004050 I 0.853
ENSOARG00000014467 Ovis aries ENSOARG00000014467 I 0.853
ENSOCUG00000000451 Oryctolagus cuniculus ENSOCUG00000000451 I 0.853
EOMES Otolemur garnettii ENSOGAG00000030966 I 0.853
ENSPANG00000011539 Papio anubis ENSPANG00000011539 I 0.853
EOMES Procavia capensis ENSPCAG00000013650 I 0.853
ENSPPYG00000014055 Pongo abelii ENSPPYG00000014055 I 0.853
EOMES Pan troglodytes ENSPTRG00000014705 I 0.853
ENSSHAG00000017378 Sarcophilus harrisii ENSSHAG00000017378 I 0.853
ENSSSCG00000011219 Sus scrofa ENSSSCG00000011219 I 0.853
ENSSSCG00000022626 Sus scrofa ENSSSCG00000022626 I 0.853
ENSSTOG00000020918 Ictidomys tridecemlineatus ENSSTOG00000020918 I 0.853
ENSPFOG00000017938 Poecilia formosa ENSPFOG00000017938 I 0.852
eomesb Takifugu rubripes ENSTRUG00000008966 I 0.852
EOMES Equus caballus ENSECAG00000021052 I 0.850
EOMES Myotis lucifugus ENSMLUG00000001462 I 0.850
Alligator_sinensis_CCG014450.1 Alligator sinensis Alligator_sinensis_CCG014450.1 I 0.850
EOMES Callithrix jacchus ENSCJAG00000004263 I 0.849
tbr1b Tetraodon nigroviridis ENSTNIG00000016497 I 0.848
eomesb Oryzias latipes ENSORLG00000005393 I 0.847
Tbr1 Rattus norvegicus ENSRNOG00000005049 I 0.845
tbx21 Xenopus tropicalis XB-GENE-479103 I 0.843
tbr1a Danio rerio ENSDARG00000076259 I 0.842
eomes.L Xenopus laevis XB-GENE-865305 I 0.839
eomesa Gasterosteus aculeatus ENSGACG00000003160 I 0.838
ENSGMOG00000002634 Gadus morhua ENSGMOG00000002634 I 0.838
eomesb Danio rerio ENSDARG00000104243 I 0.836
ENSAMXG00000012247 Astyanax mexicanus ENSAMXG00000012247 I 0.835
eomesb Gasterosteus aculeatus ENSGACG00000006345 I 0.835
eomesa Tetraodon nigroviridis ENSTNIG00000017582 I 0.835
eomesa Takifugu rubripes ENSTRUG00000005361 I 0.835
eomesa Danio rerio ENSDARG00000006640 I 0.834
eomesa Oryzias latipes ENSORLG00000002320 I 0.834
ENSPFOG00000006471 Poecilia formosa ENSPFOG00000006471 I 0.834
ENSXMAG00000000528 Xiphophorus maculatus ENSXMAG00000000528 I 0.834
AAI66068 Xenopus tropicalis AAI66068 I 0.834
ENSONIG00000019678 Oreochromis niloticus ENSONIG00000019678 I 0.831
Brh_R007719 Buceros rhinoceros Brh_R007719 I 0.831
ENSXMAG00000014284 Xiphophorus maculatus ENSXMAG00000014284 I 0.830
ENSP00000388620 Macaca fascicularis ENSP00000388620 I 0.825
ENSP00000388620-D1 Bos grunniens ENSP00000388620-D1 I 0.823
ENSPMAG00000003985 Petromyzon marinus ENSPMAG00000003985 I 0.822
ENSGMOG00000003675 Gadus morhua ENSGMOG00000003675 I 0.813
Sakowv30002752m.g Saccoglossus kowalevskii Sakowv30002752m.g I 0.813
ENSLACG00000016985 Latimeria chalumnae ENSLACG00000016985 I 0.812
estExt_fgenesh2_kg.C_1840001 Branchiostoma floridae estExt_fgenesh2_kg.C_1840001 I 0.797
fgenesh2_pg.scaffold_55000054 Branchiostoma floridae fgenesh2_pg.scaffold_55000054 I 0.797
A0A075Q982_PATMI Patiria miniata A0A075Q982_PATMI D 0.789
EOMES Ornithorhynchus anatinus ENSOANG00000012619 I 0.772
Tbx21 Rattus norvegicus ENSRNOG00000009427 I 0.768
LotgiG129911 Lottia gigantea LotgiG129911 I 0.764
ENSAMEG00000004661 Ailuropoda melanoleuca ENSAMEG00000004661 I 0.763
TBX21 Canis familiaris ENSCAFG00000016705 I 0.763
ENSCSAG00000002587 Chlorocebus sabaeus ENSCSAG00000002587 I 0.763
Tbx21 Dipodomys ordii ENSDORG00000013302 I 0.763
TBX21 Felis catus ENSFCAG00000010607 I 0.763
TBX21 Homo sapiens ENSG00000073861 D 0.763
TBX21 Gorilla gorilla ENSGGOG00000002208 I 0.763
TBX21 Macaca mulatta ENSMMUG00000007098 I 0.763
ENSMPUG00000015272 Mustela putorius furo ENSMPUG00000015272 I 0.763
Tbx21 Mus musculus ENSMUSG00000001444 D 0.763
ENSNLEG00000001655 Nomascus leucogenys ENSNLEG00000001655 I 0.763
ENSOARG00000008340 Ovis aries ENSOARG00000008340 I 0.763
TBX21 Oryctolagus cuniculus ENSOCUG00000012907 I 0.763
TBX21 Otolemur garnettii ENSOGAG00000006160 I 0.763
ENSPPYG00000008879 Pongo abelii ENSPPYG00000008879 I 0.763
TBX21 Pan troglodytes ENSPTRG00000009335 I 0.763
TBX21 Pteropus vampyrus ENSPVAG00000004921 I 0.763
TBX21 Sus scrofa ENSSSCG00000017517 I 0.763
ENSSTOG00000001626 Ictidomys tridecemlineatus ENSSTOG00000001626 I 0.763
ENSP00000177694 Macaca fascicularis ENSP00000177694 I 0.763
Myotis_brandtii_KPNB1_10030428 Myotis brandtii Myotis_brandtii_KPNB1_10030428 I 0.763
TBX21 Myotis lucifugus ENSMLUG00000014542 I 0.761
TBX21 Bos taurus ENSBTAG00000014199 I 0.760
ENSBTAP00000018875-D1 Bos grunniens ENSBTAP00000018875-D1 I 0.760
SPU_025584 Strongylocentrotus purpuratus SPU_025584 D 0.759
CapteG223644 Capitella teleta CapteG223644 I 0.755
TBX21 Callithrix jacchus ENSCJAG00000007796 I 0.755
EOMES Pteropus vampyrus ENSPVAG00000009999 I 0.750
Pvit_16634 Pogona vitticeps Pvit_16634 I 0.746
TBX21 Cavia porcellus ENSCPOG00000026273 I 0.737
ENSCSAG00000009676 Chlorocebus sabaeus ENSCSAG00000009676 I 0.737
CGI_10020437 Crassostrea gigas CGI_10020437 I 0.734