CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0001971401
(
Heligmosomoides bakeri
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
HPBE_0001971401
T341748_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0001971401-mRNA-1
T-box
2
79
KKNSQKRQKITKQKRNITTVVKICVPLTYFHFCSHHFTSYCSSFRFDFMTFIAVTAYQNSEVTQLKISYNPFAKGFRE
Links
Other
T-box
family TFs
Other
Heligmosomoides bakeri
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBR_0001177301
Nippostrongylus brasiliensis
NBR_0001177301
N
0.815
OESDEN_07954
Oesophagostomum dentatum
OESDEN_07954
N
0.806
ANCDUO_27140
Ancylostoma duodenale
ANCDUO_27140
N
0.771
ANCDUO_17822
Ancylostoma duodenale
ANCDUO_17822
N
0.770
ENSDORG00000012736
Dipodomys ordii
ENSDORG00000012736
I
0.759
ENSPCAG00000011680
Procavia capensis
ENSPCAG00000011680
N
0.759
Afo_R005342
Aptenodytes forsteri
Afo_R005342
N
0.759
Brh_R011566
Buceros rhinoceros
Brh_R011566
N
0.759
Tal_R004166
Tyto alba
Tal_R004166
N
0.759
ECPE_0000395601
Echinostoma caproni
ECPE_0000395601
N
0.755
HHAL010563-PA
Halyomorpha halys
HHAL010563-PA
N
0.753
PPA14512
Pristionchus pacificus
PPA14512
N
0.748
SINV20004
Solenopsis invicta
SINV20004
N
0.748
Tal_R010698
Tyto alba
Tal_R010698
N
0.748
OESDEN_02780
Oesophagostomum dentatum
OESDEN_02780
N
0.748
SPER_0002063901
Spirometra erinaceieuropaei
SPER_0002063901
N
0.748
SPER_0003769001
Spirometra erinaceieuropaei
SPER_0003769001
N
0.748
SPER_0003779701
Spirometra erinaceieuropaei
SPER_0003779701
N
0.748
ENSOANG00000020395
Ornithorhynchus anatinus
ENSOANG00000020395
I
0.746
BGLB011455
Biomphalaria glabrata
BGLB011455
N
0.746
SMUV_0000075501
Syphacia muris
SMUV_0000075501
N
0.746
Ocbimv22013221m.g
Octopus bimaculoides
Ocbimv22013221m.g
N
0.744
L798_14238
Zootermopsis nevadensis
L798_14238
N
0.738
EVEC_0000447801
Enterobius vermicularis
EVEC_0000447801
N
0.738
HCOI01136500
Haemonchus contortus
HCOI01136500
N
0.735