CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0000780601
(
Schistosoma rodhaini
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
SROB_0000780601
T341959_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0000780601-mRNA-1
T-box
2
62
NFLGKGDPQITPRIHLHPDGIASGTYWMRQAILFDKLKLTNNPFDQNGHVSVYLQKFFFLK
Links
Other
T-box
family TFs
Other
Schistosoma rodhaini
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_101790
Schistosoma mansoni
Smp_101790
N
0.871
SCUD_0002048801
Schistosoma curassoni
SCUD_0002048801
N
0.870
SMTD_0001831301
Schistosoma mattheei
SMTD_0001831301
N
0.863
ACEP21923
Atta cephalotes
ACEP21923
N
0.801
WUBG_18569
Wuchereria bancrofti
WUBG_18569
N
0.797
RPRC007267
Rhodnius prolixus
RPRC007267
N
0.793
BGIBMGA012897
Bombyx mori
BGIBMGA012897
N
0.774
SINV17864
Solenopsis invicta
SINV17864
N
0.774
augustus_masked-nMf.1.1.scaf07901-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf07901-processed-gene-0.0
N
0.774
GPUH_0000570001
Gongylonema pulchrum
GPUH_0000570001
N
0.771
ANCCEY_10148
Ancylostoma ceylanicum
ANCCEY_10148
N
0.763
snap_masked-nMf.1.1.scaf23208-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf23208-processed-gene-0.2
N
0.762
BGLB006532
Biomphalaria glabrata
BGLB006532
N
0.758
CpipJ_CPIJ000432
Culex pipiens
CpipJ_CPIJ000432
N
0.757
CPIJ000432
Culex quinquefasciatus
CPIJ000432
N
0.757
HelroG92844
Helobdella robusta
HelroG92844
N
0.756
SVUK_0002073301
Strongylus vulgaris
SVUK_0002073301
N
0.756
ACEP18776
Atta cephalotes
ACEP18776
N
0.751
GPUH_0000522701
Gongylonema pulchrum
GPUH_0000522701
N
0.740
ANCDUO_18602
Ancylostoma duodenale
ANCDUO_18602
N
0.735