TBP2 (Arabidopsis thaliana)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 AT1G55520 T342132_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.856 0.856
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.856 0.856
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.856 0.856
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.832 0.832
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.832 0.832
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.832 0.832
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.832 0.832
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.832 0.832
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.832 0.832
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.832 0.832
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.832 0.832
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.832 0.832
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.832 0.832
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G55520.1 TBP 22 104
AT1G55520.1 TBP 112 195
AT1G55520.2 TBP 22 104
AT1G55520.2 TBP 112 195
AT1G55520.3 TBP 22 104
AT1G55520.3 TBP 112 183
AT1G55520.4 TBP 22 104
AT1G55520.4 TBP 112 195

Links

Other TBP family TFs
Other Arabidopsis thaliana TFs

790 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I
WRKY64 Arabidopsis thaliana AT1G66560 I
WRKY63 Arabidopsis thaliana AT1G66600 D
WRKY62 Arabidopsis thaliana AT5G01900 D
BGIOSGA000583 Oryza indica BGIOSGA000583 N
BGIOSGA004701 Oryza indica BGIOSGA004701 N
BGIOSGA004703 Oryza indica BGIOSGA004703 I
BGIOSGA004704 Oryza indica BGIOSGA004704 I
BGIOSGA012523 Oryza indica BGIOSGA012523 N
BGIOSGA012525 Oryza indica BGIOSGA012525 N
BGIOSGA017556 Oryza indica BGIOSGA017556 I
BGIOSGA017860 Oryza indica BGIOSGA017860 I
BGIOSGA017861 Oryza indica BGIOSGA017861 N
BGIOSGA030346 Oryza indica BGIOSGA030346 I
BGIOSGA032700 Oryza indica BGIOSGA032700 N
BGIOSGA034612 Oryza indica BGIOSGA034612 I
BGIOSGA034615 Oryza indica BGIOSGA034615 N
BGIOSGA034616 Oryza indica BGIOSGA034616 N
BGIOSGA036759 Oryza indica BGIOSGA036759 N
BGIOSGA036760 Oryza indica BGIOSGA036760 N
Bo4g012750 Brassica oleracea Bo4g012750 I
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I
Bra004586 Brassica rapa Bra004586 I
BRADI1G63910 Brachypodium distachyon BRADI1G63910 N
BRADI2G22230 Brachypodium distachyon BRADI2G22230 I
BRADI2G53495 Brachypodium distachyon BRADI2G53495 I
BRADI2G53500 Brachypodium distachyon BRADI2G53500 N
BRADI2G53510 Brachypodium distachyon BRADI2G53510 I
BRADI4G25717 Brachypodium distachyon BRADI4G25717 N
BRADI4G44350 Brachypodium distachyon BRADI4G44350 I
BRADI4G44360 Brachypodium distachyon BRADI4G44360 I
Carubv10021899m.g Capsella rubella Carubv10021899m.g I
Carubv10022120m.g Capsella rubella Carubv10022120m.g I
Cucsa.259110 Cucumis sativus Cucsa.259110 I
evm.TU.contig_32256 Carica papaya evm.TU.contig_32256 I
F775_02480 Aegilops tauschii F775_02480 N
F775_02926 Aegilops tauschii F775_02926 N
F775_03183 Aegilops tauschii F775_03183 N
F775_04954 Aegilops tauschii F775_04954 N
F775_22564 Aegilops tauschii F775_22564 I
F775_23182 Aegilops tauschii F775_23182 I
F775_23296 Aegilops tauschii F775_23296 N
F775_28648 Aegilops tauschii F775_28648 N
F775_31089 Aegilops tauschii F775_31089 N
F775_31341 Aegilops tauschii F775_31341 I
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I
GRMZM2G029282 Zea mays GRMZM2G029282 N
GRMZM2G029292 Zea mays GRMZM2G029292 I
GRMZM2G030272 Zea mays GRMZM2G030272 N
GRMZM2G034421 Zea mays GRMZM2G034421 N
GRMZM2G063216 Zea mays GRMZM2G063216 N
GRMZM2G065290 Zea mays GRMZM2G065290 I
GRMZM2G382350 Zea mays GRMZM2G382350 I
GRMZM2G400559 Zea mays GRMZM2G400559 N
GSMUA_Achr5G08580_001 Musa acuminata GSMUA_Achr5G08580_001 I
GSMUA_Achr7G22020_001 Musa acuminata GSMUA_Achr7G22020_001 I
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I
LPERR01G30470 Leersia perrieri LPERR01G30470 N
LPERR01G30490 Leersia perrieri LPERR01G30490 I
LPERR03G13630 Leersia perrieri LPERR03G13630 N
LPERR05G16150 Leersia perrieri LPERR05G16150 I
LPERR05G16160 Leersia perrieri LPERR05G16160 N
LPERR05G16170 Leersia perrieri LPERR05G16170 I
LPERR10G04210 Leersia perrieri LPERR10G04210 I
LPERR11G00950 Leersia perrieri LPERR11G00950 N
LPERR12G01060 Leersia perrieri LPERR12G01060 N
Lus10014177.g Linum usitatissimum Lus10014177.g I
Lus10022736.g Linum usitatissimum Lus10022736.g I
MLOC_11088 Hordeum vulgare MLOC_11088 N
MLOC_34506 Hordeum vulgare MLOC_34506 N
MLOC_34522 Hordeum vulgare MLOC_34522 N
MLOC_3853 Hordeum vulgare MLOC_3853 N
MLOC_57051 Hordeum vulgare MLOC_57051 I
MLOC_57764 Hordeum vulgare MLOC_57764 N
MLOC_6114 Hordeum vulgare MLOC_6114 I
OB01G44130 Oryza brachyantha OB01G44130 I
OB01G44140 Oryza brachyantha OB01G44140 I
OB01G44150 Oryza brachyantha OB01G44150 I
OB03G25300 Oryza brachyantha OB03G25300 N
OB05G27830 Oryza brachyantha OB05G27830 I
OB05G27840 Oryza brachyantha OB05G27840 N
OB05G27850 Oryza brachyantha OB05G27850 I
OB11G10740 Oryza brachyantha OB11G10740 N
OB12G11010 Oryza brachyantha OB12G11010 N
OBART01G35280 Oryza barthii OBART01G35280 N
OBART01G35350 Oryza barthii OBART01G35350 I
OBART03G15470 Oryza barthii OBART03G15470 N
OBART05G08130 Oryza barthii OBART05G08130 I
OBART05G20320 Oryza barthii OBART05G20320 N
OBART05G20330 Oryza barthii OBART05G20330 I
OBART05G20340 Oryza barthii OBART05G20340 I
OBART10G05920 Oryza barthii OBART10G05920 N
OBART11G01090 Oryza barthii OBART11G01090 N
OBART11G01110 Oryza barthii OBART11G01110 I
OBART12G00800 Oryza barthii OBART12G00800 N
OBART12G00820 Oryza barthii OBART12G00820 N
OGLUM01G39350 Oryza glumaepatula OGLUM01G39350 N
OGLUM01G39380 Oryza glumaepatula OGLUM01G39380 N
OGLUM03G15660 Oryza glumaepatula OGLUM03G15660 N
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I
OGLUM05G21430 Oryza glumaepatula OGLUM05G21430 N
OGLUM05G21440 Oryza glumaepatula OGLUM05G21440 I
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I
OGLUM11G00870 Oryza glumaepatula OGLUM11G00870 I
OGLUM12G01250 Oryza glumaepatula OGLUM12G01250 N
OGLUM12G01270 Oryza glumaepatula OGLUM12G01270 N
OGLUM12G01320 Oryza glumaepatula OGLUM12G01320 N
OLONG_000628 Oryza longistaminata OLONG_000628 N
OLONG_000632 Oryza longistaminata OLONG_000632 N
OLONG_001744 Oryza longistaminata OLONG_001744 N
OLONG_007113 Oryza longistaminata OLONG_007113 N
OLONG_019907 Oryza longistaminata OLONG_019907 I
OLONG_022888 Oryza longistaminata OLONG_022888 N
OLONG_027124 Oryza longistaminata OLONG_027124 I
OLONG_028722 Oryza longistaminata OLONG_028722 N
OMERI01G32440 Oryza meridionalis OMERI01G32440 N
OMERI01G32480 Oryza meridionalis OMERI01G32480 I
OMERI01G32490 Oryza meridionalis OMERI01G32490 I
OMERI01G32500 Oryza meridionalis OMERI01G32500 N
OMERI05G18170 Oryza meridionalis OMERI05G18170 I
OMERI05G18240 Oryza meridionalis OMERI05G18240 N
OMERI05G18250 Oryza meridionalis OMERI05G18250 I
OMERI05G18260 Oryza meridionalis OMERI05G18260 I
OMERI10G04260 Oryza meridionalis OMERI10G04260 N
OMERI11G01480 Oryza meridionalis OMERI11G01480 N
OMERI12G00120 Oryza meridionalis OMERI12G00120 N
ONIVA01G40340 Oryza nivara ONIVA01G40340 I
ONIVA01G40370 Oryza nivara ONIVA01G40370 I
ONIVA01G40380 Oryza nivara ONIVA01G40380 N
ONIVA03G16490 Oryza nivara ONIVA03G16490 N
ONIVA05G08650 Oryza nivara ONIVA05G08650 I
ONIVA05G21440 Oryza nivara ONIVA05G21440 I
ONIVA05G21450 Oryza nivara ONIVA05G21450 N
ONIVA05G21460 Oryza nivara ONIVA05G21460 I
ONIVA10G05410 Oryza nivara ONIVA10G05410 N
ONIVA11G01010 Oryza nivara ONIVA11G01010 N
ONIVA11G01030 Oryza nivara ONIVA11G01030 N
ONIVA11G01240 Oryza nivara ONIVA11G01240 I
ONIVA12G00800 Oryza nivara ONIVA12G00800 N
OPUNC01G34260 Oryza punctata OPUNC01G34260 N
OPUNC01G34270 Oryza punctata OPUNC01G34270 N
OPUNC01G34280 Oryza punctata OPUNC01G34280 I
OPUNC01G34290 Oryza punctata OPUNC01G34290 N
OPUNC03G15030 Oryza punctata OPUNC03G15030 N
OPUNC05G07410 Oryza punctata OPUNC05G07410 I
OPUNC05G17980 Oryza punctata OPUNC05G17980 I
OPUNC05G17990 Oryza punctata OPUNC05G17990 N
OPUNC05G18000 Oryza punctata OPUNC05G18000 I
OPUNC05G18030 Oryza punctata OPUNC05G18030 I
OPUNC10G05310 Oryza punctata OPUNC10G05310 N
OPUNC11G00930 Oryza punctata OPUNC11G00930 N
OPUNC11G00940 Oryza punctata OPUNC11G00940 N
OPUNC12G00950 Oryza punctata OPUNC12G00950 N
OPUNC12G00960 Oryza punctata OPUNC12G00960 N
ORGLA01G0291600 Oryza glaberrima ORGLA01G0291600 N
ORGLA01G0291800 Oryza glaberrima ORGLA01G0291800 I
ORGLA01G0291900 Oryza glaberrima ORGLA01G0291900 I
ORGLA01G0292000 Oryza glaberrima ORGLA01G0292000 N
ORGLA03G0148400 Oryza glaberrima ORGLA03G0148400 N
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I
ORGLA05G0177300 Oryza glaberrima ORGLA05G0177300 N
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I
ORGLA10G0049300 Oryza glaberrima ORGLA10G0049300 N
ORGLA11G0201700 Oryza glaberrima ORGLA11G0201700 N
ORGLA11G0202000 Oryza glaberrima ORGLA11G0202000 I
ORGLA12G0007100 Oryza glaberrima ORGLA12G0007100 N
ORGLA12G0007300 Oryza glaberrima ORGLA12G0007300 N
ORUFI01G38630 Oryza rufipogon ORUFI01G38630 N
ORUFI01G38660 Oryza rufipogon ORUFI01G38660 I
ORUFI01G38670 Oryza rufipogon ORUFI01G38670 I
ORUFI01G38680 Oryza rufipogon ORUFI01G38680 N
ORUFI03G16080 Oryza rufipogon ORUFI03G16080 N
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I
ORUFI05G21590 Oryza rufipogon ORUFI05G21590 N
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I
ORUFI10G06270 Oryza rufipogon ORUFI10G06270 N
ORUFI11G01010 Oryza rufipogon ORUFI11G01010 N
ORUFI11G01040 Oryza rufipogon ORUFI11G01040 N
ORUFI12G01140 Oryza rufipogon ORUFI12G01140 N
ORUFI12G01160 Oryza rufipogon ORUFI12G01160 N
OS01G0820400 Oryza sativa OS01G0820400 N
OS01G0820700 Oryza sativa OS01G0820700 I
OS03G0321700 Oryza sativa OS03G0321700 N
OS05G0478400 Oryza sativa OS05G0478400 I
OS05G0478700 Oryza sativa OS05G0478700 N
OS05G0478800 Oryza sativa OS05G0478800 I
OS11G0116900 Oryza sativa OS11G0116900 N
OS12G0116400 Oryza sativa OS12G0116400 N
Pavir.Ca00084 Panicum virgatum Pavir.Ca00084 N
Pavir.Ca00178 Panicum virgatum Pavir.Ca00178 N
Pavir.Eb03559 Panicum virgatum Pavir.Eb03559 I
Pavir.Ga01476 Panicum virgatum Pavir.Ga01476 N
Pavir.Ga02545 Panicum virgatum Pavir.Ga02545 N
Pavir.Hb02025 Panicum virgatum Pavir.Hb02025 N
Pavir.Ib01500 Panicum virgatum Pavir.Ib01500 N
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I
Pavir.J05812 Panicum virgatum Pavir.J05812 I
Pavir.J07662 Panicum virgatum Pavir.J07662 I
Pavir.J09582 Panicum virgatum Pavir.J09582 N
Pavir.J16737 Panicum virgatum Pavir.J16737 N
Pavir.J18239 Panicum virgatum Pavir.J18239 I
Pavir.J31756 Panicum virgatum Pavir.J31756 I
Pavir.J35902 Panicum virgatum Pavir.J35902 I
Pavir.J37617 Panicum virgatum Pavir.J37617 N
Pavir.J38024 Panicum virgatum Pavir.J38024 N
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I
Sb01g036870 Sorghum bicolor Sb01g036870 N
Sb03g038170 Sorghum bicolor Sb03g038170 I
Sb03g038180 Sorghum bicolor Sb03g038180 I
Sb03g038190 Sorghum bicolor Sb03g038190 N
Sb05g001220 Sorghum bicolor Sb05g001220 N
Sb08g002560 Sorghum bicolor Sb08g002560 N
Sb09g023500 Sorghum bicolor Sb09g023500 N
Si004791m.g Setaria italica Si004791m.g I
Si005138m.g Setaria italica Si005138m.g N
Si011007m.g Setaria italica Si011007m.g N
Si012735m.g Setaria italica Si012735m.g I
Si022933m.g Setaria italica Si022933m.g N
Si026831m.g Setaria italica Si026831m.g N
Si027328m.g Setaria italica Si027328m.g N
Si027574m.g Setaria italica Si027574m.g I
Si027876m.g Setaria italica Si027876m.g N
Si027946m.g Setaria italica Si027946m.g N
Si039519m.g Setaria italica Si039519m.g N
Solyc05g050050.1 Solanum lycopersicum Solyc05g050050.1 I
TCM_005179 Theobroma cacao TCM_005179 I
TCM_006103 Theobroma cacao TCM_006103 I
TRAES3BF081400030CFD_g Triticum aestivum TRAES3BF081400030CFD_g I
Traes_1AL_309623B48 Triticum aestivum Traes_1AL_309623B48 N
Traes_1AL_B24F28600 Triticum aestivum Traes_1AL_B24F28600 I
Traes_1BL_46340D685 Triticum aestivum Traes_1BL_46340D685 N
Traes_1BL_B4AFDB663 Triticum aestivum Traes_1BL_B4AFDB663 I
Traes_1DL_DFE1721E0 Triticum aestivum Traes_1DL_DFE1721E0 N
Traes_3AL_2297D6E18 Triticum aestivum Traes_3AL_2297D6E18 I
Traes_3B_8B0D448D8 Triticum aestivum Traes_3B_8B0D448D8 I
Traes_3DL_48F7A19D2 Triticum aestivum Traes_3DL_48F7A19D2 I
Traes_4AL_9E0D1CFA6 Triticum aestivum Traes_4AL_9E0D1CFA6 N
Traes_4AS_70DF607CC Triticum aestivum Traes_4AS_70DF607CC N
Traes_4BL_A8C6FBEB6 Triticum aestivum Traes_4BL_A8C6FBEB6 N
Traes_4BS_A6D9EB0E5 Triticum aestivum Traes_4BS_A6D9EB0E5 N
Traes_4DL_3140A8240 Triticum aestivum Traes_4DL_3140A8240 N
Traes_4DS_FE38A59D0 Triticum aestivum Traes_4DS_FE38A59D0 N
Traes_5AL_69A969FF4 Triticum aestivum Traes_5AL_69A969FF4 N
TRIUR3_06231 Triticum urartu TRIUR3_06231 N
TRIUR3_16097 Triticum urartu TRIUR3_16097 N
TRIUR3_22129 Triticum urartu TRIUR3_22129 N
TRIUR3_27575 Triticum urartu TRIUR3_27575 I
TRIUR3_31234 Triticum urartu TRIUR3_31234 N
TRIUR3_34396 Triticum urartu TRIUR3_34396 I