CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGHDH14_bgh06421
(
Blumeria graminis
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
BGHDH14_bgh06421
T342141_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW
WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.916
0.916
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.916
0.916
SPT15
M11393_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.916
0.916
Tbp
M00216_2.00
Mus musculus
NWWWWAW
WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.826
0.826
TBP
M08231_2.00
Homo sapiens
YATTTGCATD
HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.826
0.826
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS
SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.826
0.826
Tbp
M09433_2.00
Mus musculus
VTATAAAARS
SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.826
0.826
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.826
0.826
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD
HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.826
0.826
TBP
M11390_2.00
Homo sapiens
KATAAATW
WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.826
0.826
TBP
M11391_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.826
0.826
TBP
M11392_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.826
0.826
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.826
0.826
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCU81921
TBP
85
167
VPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKL
CCU81921
TBP
175
258
DFKIQNIVGSCDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF
Links
Other
TBP
family TFs
Other
Blumeria graminis
TFs
773 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30063.m001417
Ricinus communis
30063.m001417
I
AMTR_s00059p00187950
Amborella trichopoda
AMTR_s00059p00187950
I
AMTR_s00099p00163300
Amborella trichopoda
AMTR_s00099p00163300
I
ANAC034
Arabidopsis lyrata
fgenesh2_kg.5__152__AT2G02450.1
I
ANAC034
Vitis vinifera
VIT_12s0035g02020
I
Aquca_014_00018
Aquilegia coerulea
Aquca_014_00018
I
BGIOSGA004950
Oryza indica
BGIOSGA004950
I
BGIOSGA004951
Oryza indica
BGIOSGA004951
I
BGIOSGA018041
Oryza indica
BGIOSGA018041
I
BGIOSGA027877
Oryza indica
BGIOSGA027877
I
Bo2g136280
Brassica oleracea
Bo2g136280
I
Bo7g080470
Brassica oleracea
Bo7g080470
I
Bo9g071690
Brassica oleracea
Bo9g071690
I
Bostr.0556s0069
Boechera stricta
Bostr.0556s0069
I
Bra017416
Brassica rapa
Bra017416
I
Bra024818
Brassica rapa
Bra024818
I
Bra026595
Brassica rapa
Bra026595
I
BRADI2G25150
Brachypodium distachyon
BRADI2G25150
I
BRADI2G57297
Brachypodium distachyon
BRADI2G57297
I
Cagra.0534s0046
Capsella grandiflora
Cagra.0534s0046
I
Carubv10017334m.g
Capsella rubella
Carubv10017334m.g
I
cassava17150.m1
Manihot esculenta
cassava17150.m1
I
cassava23178.valid.m1
Manihot esculenta
cassava23178.valid.m1
I
Ca_18171
Cicer arietinum
Ca_18171
I
chr4.CM0525.60.nd
Lotus japonicus
chr4.CM0525.60.nd
I
Ciclev10001346m.g
Citrus clementina
Ciclev10001346m.g
I
Ciclev10001401m.g
Citrus clementina
Ciclev10001401m.g
I
Cla004630
Citrullus lanatus
Cla004630
I
Cucsa.260400
Cucumis sativus
Cucsa.260400
I
Eucgr.G00054
Eucalyptus grandis
Eucgr.G00054
I
F775_01256
Aegilops tauschii
F775_01256
I
F775_03877
Aegilops tauschii
F775_03877
I
gene29260-v1.0-hybrid
Fragaria vesca
gene29260-v1.0-hybrid
I
GLYMA07G40140
Glycine max
GLYMA07G40140
I
GLYMA17G00650
Glycine max
GLYMA17G00650
I
Gorai.010G142400
Gossypium raimondii
Gorai.010G142400
I
Gorai.011G090000
Gossypium raimondii
Gorai.011G090000
I
GRMZM2G134687
Zea mays
GRMZM2G134687
I
GRMZM2G147867
Zea mays
GRMZM2G147867
I
GRMZM5G813651
Zea mays
GRMZM5G813651
I
GSMUA_Achr10G04320_001
Musa acuminata
GSMUA_Achr10G04320_001
I
GSMUA_Achr10G10690_001
Musa acuminata
GSMUA_Achr10G10690_001
I
GSMUA_Achr11G08970_001
Musa acuminata
GSMUA_Achr11G08970_001
I
GSMUA_Achr3G21690_001
Musa acuminata
GSMUA_Achr3G21690_001
I
GSMUA_Achr5G17060_001
Musa acuminata
GSMUA_Achr5G17060_001
I
GSMUA_Achr7G23650_001
Musa acuminata
GSMUA_Achr7G23650_001
I
LPERR01G34330
Leersia perrieri
LPERR01G34330
I
LPERR05G13320
Leersia perrieri
LPERR05G13320
I
LPERR08G01330
Leersia perrieri
LPERR08G01330
I
Lus10003367.g
Linum usitatissimum
Lus10003367.g
I
Lus10008419.g
Linum usitatissimum
Lus10008419.g
I
Lus10008420.g
Linum usitatissimum
Lus10008420.g
I
Lus10008897.g
Linum usitatissimum
Lus10008897.g
I
Lus10023208.g
Linum usitatissimum
Lus10023208.g
I
MDP0000189394
Malus domestica
MDP0000189394
I
MDP0000679946
Malus domestica
MDP0000679946
I
mgf015326m
Mimulus guttatus
mgf015326m
I
MLOC_57215
Hordeum vulgare
MLOC_57215
I
MLOC_69621
Hordeum vulgare
MLOC_69621
I
MTR_4g134460
Medicago truncatula
MTR_4g134460
I
NAC035
Arabidopsis thaliana
AT2G02450
D
OB01G48600
Oryza brachyantha
OB01G48600
I
OB05G24670
Oryza brachyantha
OB05G24670
I
OB08G11180
Oryza brachyantha
OB08G11180
I
OBART01G39900
Oryza barthii
OBART01G39900
I
OBART05G16760
Oryza barthii
OBART05G16760
I
OBART08G01010
Oryza barthii
OBART08G01010
I
OGLUM01G44090
Oryza glumaepatula
OGLUM01G44090
I
OGLUM05G17770
Oryza glumaepatula
OGLUM05G17770
I
OGLUM08G01070
Oryza glumaepatula
OGLUM08G01070
I
OLONG_011893
Oryza longistaminata
OLONG_011893
I
OLONG_025605
Oryza longistaminata
OLONG_025605
I
OMERI05G14550
Oryza meridionalis
OMERI05G14550
I
OMERI08G01230
Oryza meridionalis
OMERI08G01230
I
ONIVA01G44740
Oryza nivara
ONIVA01G44740
I
ONIVA05G17420
Oryza nivara
ONIVA05G17420
I
ONIVA08G01010
Oryza nivara
ONIVA08G01010
I
OPUNC01G38590
Oryza punctata
OPUNC01G38590
I
OPUNC05G14760
Oryza punctata
OPUNC05G14760
I
OPUNC08G00950
Oryza punctata
OPUNC08G00950
I
orange1.1g016095m.g
Citrus sinensis
orange1.1g016095m.g
I
orange1.1g046996m.g
Citrus sinensis
orange1.1g046996m.g
I
ORGLA01G0337900
Oryza glaberrima
ORGLA01G0337900
I
ORGLA05G0144900
Oryza glaberrima
ORGLA05G0144900
I
ORGLA08G0004000
Oryza glaberrima
ORGLA08G0004000
I
ORUFI05G17970
Oryza rufipogon
ORUFI05G17970
I
ORUFI08G01040
Oryza rufipogon
ORUFI08G01040
I
OS01G0888300
Oryza sativa
OS01G0888300
I
OS05G0418800
Oryza sativa
OS05G0418800
I
Pavir.Ea03596
Panicum virgatum
Pavir.Ea03596
I
Pavir.Fa02204
Panicum virgatum
Pavir.Fa02204
N
Pavir.J00477
Panicum virgatum
Pavir.J00477
I
Pavir.J03312
Panicum virgatum
Pavir.J03312
I
Pavir.J07491
Panicum virgatum
Pavir.J07491
I
PDK_20s1594511g001
Phoenix dactylifera
PDK_20s1594511g001
I
PGSC0003DMG400018262
Solanum tuberosum
PGSC0003DMG400018262
I
PK24240.1
Cannabis sativa
PK24240.1
I
Pm003809
Prunus mume
Pm003809
I
POPTR_0003s03670
Populus trichocarpa
POPTR_0003s03670
I
POPTR_0004s23970
Populus trichocarpa
POPTR_0004s23970
I
PRUPE_ppa021989m2g
Prunus persica
PRUPE_ppa021989m2g
I
SapurV1A.0198s0420
Salix purpurea
SapurV1A.0198s0420
I
SapurV1A.0847s0050
Salix purpurea
SapurV1A.0847s0050
I
Sb03g042210
Sorghum bicolor
Sb03g042210
I
Sb09g020590
Sorghum bicolor
Sb09g020590
I
Si001651m.g
Setaria italica
Si001651m.g
I
Si013995m.g
Setaria italica
Si013995m.g
N
Si022103m.g
Setaria italica
Si022103m.g
I
Solyc01g102740.2
Solanum lycopersicum
Solyc01g102740.2
I
TCM_027945
Theobroma cacao
TCM_027945
I
Thhalv10004330m.g
Eutrema salsugineum
Thhalv10004330m.g
I
TRAES3BF097200010CFD_g
Triticum aestivum
TRAES3BF097200010CFD_g
I
TRAES3BF098000010CFD_g
Triticum aestivum
TRAES3BF098000010CFD_g
I
TRAES3BF114300070CFD_g
Triticum aestivum
TRAES3BF114300070CFD_g
I
Traes_3AL_490F09661
Triticum aestivum
Traes_3AL_490F09661
I
TRIUR3_28413
Triticum urartu
TRIUR3_28413
I
TRIUR3_29543
Triticum urartu
TRIUR3_29543
I