Bo3g003940 (Brassica oleracea)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 Bo3g003940 T342153_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g003940.1 TBP 23 67
Bo3g003940.1 TBP 75 164

Links

Other TBP family TFs
Other Brassica oleracea TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g114190 Brassica oleracea Bo8g114190 I 0.820
Bra005902 Brassica rapa Bra005902 I 0.773
Bo2g007300 Brassica oleracea Bo2g007300 I 0.750
Bo5g132530 Brassica oleracea Bo5g132530 I 0.742
Bra027434 Brassica rapa Bra027434 I 0.742
Bo6g051360 Brassica oleracea Bo6g051360 I 0.734
TBP2 Arabidopsis lyrata fgenesh2_kg.1__4564__AT1G55520.2 I 0.734
GSMUA_Achr1G26830_001 Musa acuminata GSMUA_Achr1G26830_001 I 0.734
Bostr.3640s0136 Boechera stricta Bostr.3640s0136 I 0.734
Bostr.6758s0027 Boechera stricta Bostr.6758s0027 I 0.734
TBP2 Arabidopsis thaliana AT1G55520 I 0.727
Bra028725 Brassica rapa Bra028725 I 0.727
Cagra.0690s0017 Capsella grandiflora Cagra.0690s0017 I 0.727
Carubv10014676m.g Capsella rubella Carubv10014676m.g I 0.727
Bo3g185290 Brassica oleracea Bo3g185290 I 0.719
Bra030855 Brassica rapa Bra030855 I 0.719
BRADI4G01150 Brachypodium distachyon BRADI4G01150 I 0.719
GRMZM2G149238 Zea mays GRMZM2G149238 I 0.719
GRMZM2G161418 Zea mays GRMZM2G161418 I 0.719
Sb08g022273 Sorghum bicolor Sb08g022273 I 0.719
29950.m001154 Ricinus communis 29950.m001154 I 0.719
cassava22625.valid.m1 Manihot esculenta cassava22625.valid.m1 I 0.719
cassava35684.valid.m1 Manihot esculenta cassava35684.valid.m1 I 0.719
Cagra.0001s0028 Capsella grandiflora Cagra.0001s0028 I 0.719
Carubv10010337m.g Capsella rubella Carubv10010337m.g I 0.719
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I 0.719
Gorai.007G288000 Gossypium raimondii Gorai.007G288000 I 0.719
Gorai.013G202900 Gossypium raimondii Gorai.013G202900 I 0.719
MDP0000289755 Malus domestica MDP0000289755 I 0.719
SapurV1A.0680s0010 Salix purpurea SapurV1A.0680s0010 I 0.719
MTR_4g029010 Medicago truncatula MTR_4g029010 I 0.711
mgf009543m Mimulus guttatus mgf009543m I 0.711
gene01591-v1.0-hybrid Fragaria vesca gene01591-v1.0-hybrid I 0.711
LjT45I18.100.nd Lotus japonicus LjT45I18.100.nd I 0.711
F775_26897 Aegilops tauschii F775_26897 I 0.703
GLYMA09G41330 Glycine max GLYMA09G41330 I 0.703
MLOC_37365 Hordeum vulgare MLOC_37365 I 0.703
MTR_7g072580 Medicago truncatula MTR_7g072580 I 0.703
SapurV1A.0308s0180 Salix purpurea SapurV1A.0308s0180 I 0.703