CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.46568.971
(
Phytophthora kernoviae
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
fgenesh_scip_prom.46568.971
T342551_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.46568.971
TBP
1
69
MRFDLTNLLVKSHRKAELVPKKNCILMKLHNPKATAMLFANGKLVCTGAETEEAIKTVARRFTQVIQKM
fgenesh_scip_prom.46568.971
TBP
78
133
DFKIQNVVGSCELGFRVLVEALAFAHNDCCTYEPELYPALIYRLEKPEVKVLVFDP
Links
Other
TBP
family TFs
Other
Phytophthora kernoviae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-pir_contig_233-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_233-fgenesh-gene-0.3
N
0.840
HpaG807837
Hyaloperonospora arabidopsidis
HpaG807837
N
0.832
PYU1_G010143
Pythium ultimum
PYU1_G010143
N
0.824
PITG_12304
Phytophthora infestans
PITG_12304
N
0.743
fgenesh_scip_prom.28083.6999
Phytophthora lateralis
fgenesh_scip_prom.28083.6999
N
0.706
Physo129327
Phytophthora sojae
Physo129327
N
0.701