SPU_012621 (Strongylocentrotus purpuratus)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 SPU_012621 T342916_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.928 0.928
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.928 0.928
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.928 0.928
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.928 0.928
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.928 0.928
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.928 0.928
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.928 0.928
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.928 0.928
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.928 0.928
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.928 0.928
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.826 0.826
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.826 0.826
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.826 0.826
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPU_012621-tr TBP 88 170
SPU_012621-tr TBP 178 261

Links

Other TBP family TFs
Other Strongylocentrotus purpuratus TFs

780 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000207501 Angiostrongylus costaricensis ACOC_0000207501 N
ALUE_0000346601 Ascaris lumbricoides ALUE_0000346601 N
ANCCAN_12036 Ancylostoma caninum ANCCAN_12036 N
ANCCEY_05568 Ancylostoma ceylanicum ANCCEY_05568 N
ASU_05114 Ascaris suum ASU_05114 N
Bm4662 Brugia malayi Bm4662 N
BTMF_0001501001 Brugia timori BTMF_0001501001 N
CBG03666 Caenorhabditis briggsae CBG03666 N
CBN12315 Caenorhabditis brenneri CBN12315 N
CBN13279 Caenorhabditis brenneri CBN13279 N
CRE25006 Caenorhabditis remanei CRE25006 N
DICVIV_05986 Dictyocaulus viviparus DICVIV_05986 N
DME_0000085501 Dracunculus medinensis DME_0000085501 N
EEL_0000409901 Elaeophora elaphi EEL_0000409901 N
EVEC_0000129701 Enterobius vermicularis EVEC_0000129701 N
GPLIN_001081400 Globodera pallida GPLIN_001081400 N
HCOI00547400 Haemonchus contortus HCOI00547400 N
HPBE_0001937401 Heligmosomoides bakeri HPBE_0001937401 N
HPLM_0000813601 Haemonchus placei HPLM_0000813601 N
L596_g13814 Steinernema carpocapsae L596_g13814 N
L892_g8213 Steinernema scapterisci L892_g8213 N
L893_g25983 Steinernema glaseri L893_g25983 N
L898_g2485 Steinernema monticolum L898_g2485 N
LOAG_01771 Loa loa LOAG_01771 N
madf-3 Caenorhabditis elegans WBGene00019218 N
maker-nMf.1.1.scaf00985-augustus-gene-0.14 Meloidogyne floridensis maker-nMf.1.1.scaf00985-augustus-gene-0.14 N
nAv.1.0.1.g09008 Acanthocheilonema viteae nAv.1.0.1.g09008 N
NBR_0001082401 Nippostrongylus brasiliensis NBR_0001082401 N
nDi.2.2.2.g08480 Dirofilaria immitis nDi.2.2.2.g08480 N
NECAME_10287 Necator americanus NECAME_10287 N
nLs.2.1.2.g00834 Litomosoides sigmodontis nLs.2.1.2.g00834 N
nOo.2.0.1.g01489 Onchocerca ochengi nOo.2.0.1.g01489 N
SMUV_0001029601 Syphacia muris SMUV_0001029601 N
TCLT_0000789301 Thelazia callipaeda TCLT_0000789301 N
WBGene00248256 Onchocerca volvulus WBGene00248256 N
WUBG_08209 Wuchereria bancrofti WUBG_08209 N