CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene04975-v1.0-hybrid
(
Fragaria vesca
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
gene04975-v1.0-hybrid
T343162_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna04975.1-v1.0-hybrid
TBP
37
118
RQFHNVISTVNLGCKLDLHQITVKAQNAEYNPKRLHSVIMRTRDPKATVLIFASGKMVCTGAKSEAESELAARKCVRTILKM
mrna04975.1-v1.0-hybrid
TBP
125
208
DFKIQNMVANSDVRFPIRLEGLAYANPQCTSYEPELFPGLRYRMKEPKITLLVFASGKLVITGAKHREDIHKAFEVIYPALEEF
Links
Other
TBP
family TFs
Other
Fragaria vesca
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene22998-v1.0-hybrid
Fragaria vesca
gene22998-v1.0-hybrid
N
0.940
gene04978-v1.0-hybrid
Fragaria vesca
gene04978-v1.0-hybrid
N
0.910
gene04980-v1.0-hybrid
Fragaria vesca
gene04980-v1.0-hybrid
N
0.910
MDP0000289755
Malus domestica
MDP0000289755
I
0.704
GRMZM2G161418
Zea mays
GRMZM2G161418
I
0.701
Gorai.004G244700
Gossypium raimondii
Gorai.004G244700
I
0.701
Pavir.Ib04166
Panicum virgatum
Pavir.Ib04166
I
0.701