CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene04980-v1.0-hybrid
(
Fragaria vesca
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
gene04980-v1.0-hybrid
T343164_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna04980.1-v1.0-hybrid
TBP
13
95
VLTIQNVISTVNLGCKLDLHQITVKAQNAEYNPKRLHSVIMRTREPKATVLIFASGKMVCTGAKSEGESKLAARKCVRTILKM
mrna04980.1-v1.0-hybrid
TBP
103
186
DFKIQNMVANSDVRFPIKLEGLAYANPQCTTYEPELFPGLRYRLKEPKITLLVFASGNLVVTGAKRREDIHKAFEVIYPALGEF
Links
Other
TBP
family TFs
Other
Fragaria vesca
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene22998-v1.0-hybrid
Fragaria vesca
gene22998-v1.0-hybrid
N
0.940
gene04975-v1.0-hybrid
Fragaria vesca
gene04975-v1.0-hybrid
N
0.910
gene04978-v1.0-hybrid
Fragaria vesca
gene04978-v1.0-hybrid
N
0.865