CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_110148
(
Phytophthora capsici
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
estExt_fgenesh1_pg.C_110148
T343275_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_110148
TBP
686
768
QLHIKNFVCSANLGMRFDLTNLLVKSHRRAELVPKKNCILMKLHNPKATAMLFANGKLVCTGAETEEAIKNVARRFTQVIQKM
estExt_fgenesh1_pg.C_110148
TBP
777
860
DFKIQNVVGTCSLGFRVLVEALAFAHSDRCTYEPELYPALIYRLEKPQVKVLVFVSGKVVFTDSKEPRQLYAACETIFPILSQF
Links
Other
TBP
family TFs
Other
Phytophthora capsici
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_17630
Phytophthora parasitica
F443_17630
N
0.982
Phyra84970
Phytophthora ramorum
Phyra84970
N
0.952
Physo129327
Phytophthora sojae
Physo129327
N
0.939
fgenesh_scip_prom.28083.6999
Phytophthora lateralis
fgenesh_scip_prom.28083.6999
N
0.922
HpaG807837
Hyaloperonospora arabidopsidis
HpaG807837
N
0.868
PITG_12304
Phytophthora infestans
PITG_12304
N
0.844
maker-pir_contig_233-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_233-fgenesh-gene-0.3
N
0.826
PYU1_G010143
Pythium ultimum
PYU1_G010143
N
0.802
maker-piw_contig_55-fgenesh-gene-0.12
Pythium iwayamai
maker-piw_contig_55-fgenesh-gene-0.12
N
0.783
maker-pve_contig_691-snap-gene-0.13
Pythium vexans
maker-pve_contig_691-snap-gene-0.13
N
0.760
ALNC14_065670
Albugo laibachii
ALNC14_065670
N
0.707