CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc02372
(
Meloidogyne incognita
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
Minc02372
T343287_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbp
M00216_2.00
Mus musculus
NWWWWAW
WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.701
0.701
TBP
M08231_2.00
Homo sapiens
YATTTGCATD
HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.701
0.701
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS
SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.701
0.701
Tbp
M09433_2.00
Mus musculus
VTATAAAARS
SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.701
0.701
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.701
0.701
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD
HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.701
0.701
TBP
M11390_2.00
Homo sapiens
KATAAATW
WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.701
0.701
TBP
M11391_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.701
0.701
TBP
M11392_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.701
0.701
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.701
0.701
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc02372
TBP
94
176
KPVLQNIVSTVNLDVRLDLNQIAKTALNSEYNPKRFSAVIMRIRDPRSTALIFNNGKIVCTGAKSEEASRLAARRFARIIQRL
Minc02372
TBP
184
267
EFKVQNLVASCDCKFRLQLEGFAITHYQFSTYEPELFPGLIYRMVKPRVVLLIFLSGKVVITGARKREHIDEAFSQVYPILKLM
Links
Other
TBP
family TFs
Other
Meloidogyne incognita
TFs
206 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf06410-snap-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf06410-snap-gene-0.8
I
0.988
MhA1_Contig350.frz3.gene2
Meloidogyne hapla
MhA1_Contig350.frz3.gene2
N
0.957
Minc14167
Meloidogyne incognita
Minc14167
I
0.802
PPA00840
Pristionchus pacificus
PPA00840
I
0.766
scaffold547-EXSNAP2012.2
Pristionchus exspectatus
scaffold547-EXSNAP2012.2
I
0.766
ANCCAN_21534
Ancylostoma caninum
ANCCAN_21534
I
0.762
tbp-1
Caenorhabditis elegans
WBGene00006542
I
0.760
ACAC_0000032501
Angiostrongylus cantonensis
ACAC_0000032501
I
0.760
ACOC_0000950001
Angiostrongylus costaricensis
ACOC_0000950001
I
0.760
BXY_1660200
Bursaphelenchus xylophilus
BXY_1660200
I
0.760
L889_g25192
Steinernema feltiae
L889_g25192
I
0.760
L898_g32593
Steinernema monticolum
L898_g32593
I
0.760
TCNE_0001669001
Toxocara canis
TCNE_0001669001
I
0.760
OFLC_0000347601
Onchocerca flexuosa
OFLC_0000347601
I
0.755
CBG09138
Caenorhabditis briggsae
CBG09138
I
0.754
CBN01059
Caenorhabditis brenneri
CBN01059
I
0.754
CJA15284
Caenorhabditis japonica
CJA15284
I
0.754
CRE07760
Caenorhabditis remanei
CRE07760
I
0.754
ANCCAN_09966
Ancylostoma caninum
ANCCAN_09966
I
0.754
ANCCEY_07137
Ancylostoma ceylanicum
ANCCEY_07137
I
0.754
ANCDUO_27670
Ancylostoma duodenale
ANCDUO_27670
I
0.754
DICVIV_03239
Dictyocaulus viviparus
DICVIV_03239
I
0.754
HCOI00585200
Haemonchus contortus
HCOI00585200
I
0.754
HCOI02047500
Haemonchus contortus
HCOI02047500
I
0.754
L596_g25394
Steinernema carpocapsae
L596_g25394
I
0.754
L892_g16529
Steinernema scapterisci
L892_g16529
I
0.754
NECAME_03068
Necator americanus
NECAME_03068
I
0.754
OESDEN_06921
Oesophagostomum dentatum
OESDEN_06921
I
0.754
Bm5856
Brugia malayi
Bm5856
I
0.749
LOAG_01904
Loa loa
LOAG_01904
I
0.749
WBGene00245666
Onchocerca volvulus
WBGene00245666
I
0.749
BTMF_0000332301
Brugia timori
BTMF_0000332301
I
0.749
DME_0000305201
Dracunculus medinensis
DME_0000305201
I
0.749
EEL_0000831901
Elaeophora elaphi
EEL_0000831901
I
0.749
EVEC_0000621801
Enterobius vermicularis
EVEC_0000621801
I
0.749
nAv.1.0.1.g05339
Acanthocheilonema viteae
nAv.1.0.1.g05339
I
0.749
nDi.2.2.2.g01504
Dirofilaria immitis
nDi.2.2.2.g01504
I
0.749
nLs.2.1.2.g02336
Litomosoides sigmodontis
nLs.2.1.2.g02336
I
0.749
nOo.2.0.1.g04267
Onchocerca ochengi
nOo.2.0.1.g04267
I
0.749
SMUV_0000093601
Syphacia muris
SMUV_0000093601
I
0.749
TCLT_0000047501
Thelazia callipaeda
TCLT_0000047501
I
0.749
SVUK_0000188301
Strongylus vulgaris
SVUK_0000188301
I
0.748
RSKR_0000436900
Rhabditophanes kr3021
RSKR_0000436900
I
0.743
ENSOANG00000022637
Ornithorhynchus anatinus
ENSOANG00000022637
I
0.741
PTRK_0001233700
Parastrongyloides trichosuri
PTRK_0001233700
I
0.741
SPAL_0001018500
Strongyloides papillosus
SPAL_0001018500
I
0.741
SSTP_0000124500
Strongyloides stercoralis
SSTP_0000124500
I
0.741
SVE_0506100
Strongyloides venezuelensis
SVE_0506100
I
0.741
TELCIR_11261
Teladorsagia circumcincta
TELCIR_11261
I
0.738
D918_02710
Trichuris suis
D918_02710
I
0.737
TMUE_s0157001700
Trichuris muris
TMUE_s0157001700
I
0.737
TTRE_0000685401
Trichuris trichiura
TTRE_0000685401
I
0.737
BGIBMGA010619
Bombyx mori
BGIBMGA010619
I
0.735
EFV53163
Trichinella spiralis
EFV53163
I
0.731
D917_07868
Trichinella nativa
D917_07868
I
0.731
WUBG_07006
Wuchereria bancrofti
WUBG_07006
I
0.725
L893_g19284
Steinernema glaseri
L893_g19284
I
0.725
nRc.2.0.1.g22836
Romanomermis culicivorax
nRc.2.0.1.g22836
I
0.725
Tbp
Mus musculus
ENSMUSG00000014767
D
0.721
Alligator_sinensis_CCG004402.1
Alligator sinensis
Alligator_sinensis_CCG004402.1
I
0.721
BGLB001531
Biomphalaria glabrata
BGLB001531
I
0.721
ENSFALG00000003735
Ficedula albicollis
ENSFALG00000003735
I
0.719
GB47180
Apis mellifera
GB47180
I
0.719
HMEL016424
Heliconius melpomene
HMEL016424
I
0.719
KGM_04261
Danaus plexippus
KGM_04261
I
0.719
MCINX007129
Melitaea cinxia
MCINX007129
I
0.719
HHAL004028-PA
Halyomorpha halys
HHAL004028-PA
I
0.719
CpipJ_CPIJ007600
Culex pipiens
CpipJ_CPIJ007600
I
0.717
CpipJ_CPIJ018368
Culex pipiens
CpipJ_CPIJ018368
I
0.717
AAEL012330
Aedes aegypti
AAEL012330
I
0.717
CPIJ007600
Culex quinquefasciatus
CPIJ007600
I
0.717
CPIJ018368
Culex quinquefasciatus
CPIJ018368
I
0.717
ENSBTAG00000046809
Bos taurus
ENSBTAG00000046809
I
0.716
ENSONIG00000011742
Oreochromis niloticus
ENSONIG00000011742
I
0.713
ISCW019416
Ixodes scapularis
ISCW019416
I
0.713
JAAARDRAFT_628099
Jaapia argillacea
JAAARDRAFT_628099
I
0.713
PHUM533080
Pediculus humanus
PHUM533080
I
0.713
tetur35g00490
Tetranychus urticae
tetur35g00490
I
0.713
YQE_02631
Dendroctonus ponderosae
YQE_02631
I
0.713
LDEC008856
Leptinotarsa decemlineata
LDEC008856
I
0.713
ADAC000533
Anopheles darlingi
ADAC000533
I
0.711
SINV24483
Solenopsis invicta
SINV24483
I
0.711
Hsal_00478--XP_623088.1_APIME
Harpegnathos saltator
Hsal_00478--XP_623088.1_APIME
I
0.711
AALB006989
Anopheles albimanus
AALB006989
I
0.711
TELCIR_16292
Teladorsagia circumcincta
TELCIR_16292
I
0.711
ACEP14716
Atta cephalotes
ACEP14716
I
0.707
ACYPI001633
Acyrthosiphon pisum
ACYPI001633
I
0.707
DAPPUDRAFT_194512
Daphnia pulex
DAPPUDRAFT_194512
I
0.707
ENSAPLG00000006951
Anas platyrhynchos
ENSAPLG00000006951
I
0.707
TBPL2
Bos taurus
ENSBTAG00000018277
I
0.707
ENSMPUG00000005807
Mustela putorius furo
ENSMPUG00000005807
I
0.707
ENSOARG00000021094
Ovis aries
ENSOARG00000021094
I
0.707
TBPL2
Sorex araneus
ENSSARG00000002412
I
0.707
ENSXMAG00000001362
Xiphophorus maculatus
ENSXMAG00000001362
I
0.707
SMAR002219
Strigamia maritima
SMAR002219
I
0.707
TC008403
Tribolium castaneum
TC008403
I
0.707
TriadG50358
Trichoplax adhaerens
TriadG50358
I
0.707
Cflo_04179--XP_623088.1_APIME
Camponotus floridanus
Cflo_04179--XP_623088.1_APIME
I
0.707
ENSBTAP00000024325-D1
Bos grunniens
ENSBTAP00000024325-D1
I
0.707
Sakowv30026288m.g
Saccoglossus kowalevskii
Sakowv30026288m.g
I
0.707
LLOJ006615
Lutzomyia longipalpis
LLOJ006615
I
0.707
PPAI004956
Phlebotomus papatasi
PPAI004956
I
0.707
AGAP010958
Anopheles gambiae
AGAP010958
I
0.705
ENSLACG00000019034
Latimeria chalumnae
ENSLACG00000019034
I
0.705
L798_11200
Zootermopsis nevadensis
L798_11200
I
0.705
NEMVEDRAFT_v1g203375
Nematostella vectensis
NEMVEDRAFT_v1g203375
I
0.705
AARA005418
Anopheles arabiensis
AARA005418
I
0.705
AATE010335
Anopheles atroparvus
AATE010335
I
0.705
ACHR004528
Anopheles christyi
ACHR004528
I
0.705
ACOM022852
Anopheles coluzzii
ACOM022852
I
0.705
ACUA022207
Anopheles culicifacies
ACUA022207
I
0.705
ADIR004511
Anopheles dirus
ADIR004511
I
0.705
AEPI009613
Anopheles epiroticus
AEPI009613
I
0.705
AFAF020957
Anopheles farauti
AFAF020957
I
0.705
AFUN000514
Anopheles funestus
AFUN000514
I
0.705
AMEM009001
Anopheles merus
AMEM009001
I
0.705
AMIN009249
Anopheles minimus
AMIN009249
I
0.705
AQUA001233
Anopheles quadriannulatus
AQUA001233
I
0.705
ASIS007912
Anopheles sinensis
ASIS007912
I
0.705
ASTEI09026
Anopheles stephensi
ASTEI09026
I
0.705
Aqu1.225918
Amphimedon queenslandica
Aqu1.225918
I
0.701
TBP
Anolis carolinensis
ENSACAG00000002576
I
0.701
ENSAMEG00000017055
Ailuropoda melanoleuca
ENSAMEG00000017055
I
0.701
ENSAMXG00000000325
Astyanax mexicanus
ENSAMXG00000000325
I
0.701
ENSAMXG00000003582
Astyanax mexicanus
ENSAMXG00000003582
I
0.701
ENSAPLG00000012687
Anas platyrhynchos
ENSAPLG00000012687
I
0.701
TBP
Canis familiaris
ENSCAFG00000004119
I
0.701
TBPL2
Canis familiaris
ENSCAFG00000015052
I
0.701
TBPL2
Callithrix jacchus
ENSCJAG00000018372
I
0.701
TBP
Callithrix jacchus
ENSCJAG00000020638
I
0.701
ENSCPOG00000001188
Cavia porcellus
ENSCPOG00000001188
I
0.701
tbp
Danio rerio
ENSDARG00000014994
I
0.701
tbpl2
Danio rerio
ENSDARG00000097302
I
0.701
ATG14
Dasypus novemcinctus
ENSDNOG00000015108
I
0.701
ENSDNOG00000037993
Dasypus novemcinctus
ENSDNOG00000037993
I
0.701
ENSDORG00000011521
Dipodomys ordii
ENSDORG00000011521
I
0.701
TBP
Equus caballus
ENSECAG00000008516
I
0.701
ENSECAG00000008702
Equus caballus
ENSECAG00000008702
I
0.701
ENSFALG00000003238
Ficedula albicollis
ENSFALG00000003238
I
0.701
TBP
Homo sapiens
ENSG00000112592
D
0.701
TBPL2
Homo sapiens
ENSG00000182521
I
0.701
tbp
Gasterosteus aculeatus
ENSGACG00000016147
I
0.701
TBP
Gallus gallus
ENSGALG00000011171
I
0.701
TBPL2
Gorilla gorilla
ENSGGOG00000001055
I
0.701
TBP
Gorilla gorilla
ENSGGOG00000011840
I
0.701
ENSGMOG00000012435
Gadus morhua
ENSGMOG00000012435
I
0.701
ENSLACG00000005118
Latimeria chalumnae
ENSLACG00000005118
I
0.701
TBP
Loxodonta africana
ENSLAFG00000006043
I
0.701
ENSLOCG00000015481
Lepisosteus oculatus
ENSLOCG00000015481
I
0.701
TBP
Meleagris gallopavo
ENSMGAG00000012179
I
0.701
TBPL2
Microcebus murinus
ENSMICG00000000943
I
0.701
TBP
Myotis lucifugus
ENSMLUG00000014582
I
0.701
TBP
Macaca mulatta
ENSMMUG00000019917
I
0.701
TBPL2
Macaca mulatta
ENSMMUG00000023041
I
0.701
TBP
Monodelphis domestica
ENSMODG00000005484
I
0.701
ENSMPUG00000007213
Mustela putorius furo
ENSMPUG00000007213
I
0.701
ENSNLEG00000000290
Nomascus leucogenys
ENSNLEG00000000290
I
0.701
ENSNLEG00000012821
Nomascus leucogenys
ENSNLEG00000012821
I
0.701
ENSOARG00000005142
Ovis aries
ENSOARG00000005142
I
0.701
TBP
Oryctolagus cuniculus
ENSOCUG00000007979
I
0.701
TBPL2
Oryctolagus cuniculus
ENSOCUG00000014738
I
0.701
TBP
Otolemur garnettii
ENSOGAG00000013997
I
0.701
ENSONIG00000017061
Oreochromis niloticus
ENSONIG00000017061
I
0.701
TBPL2
Ochotona princeps
ENSOPRG00000016699
I
0.701
tbp
Oryzias latipes
ENSORLG00000010757
I
0.701
ENSPANG00000000569
Papio anubis
ENSPANG00000000569
I
0.701
ENSPANG00000015296
Papio anubis
ENSPANG00000015296
I
0.701
ENSPFOG00000014770
Poecilia formosa
ENSPFOG00000014770
I
0.701
ENSPMAG00000006175
Petromyzon marinus
ENSPMAG00000006175
I
0.701
ENSPPYG00000005840
Pongo abelii
ENSPPYG00000005840
I
0.701
ENSPPYG00000017192
Pongo abelii
ENSPPYG00000017192
I
0.701
ENSPSIG00000010865
Pelodiscus sinensis
ENSPSIG00000010865
I
0.701
ENSPSIG00000013104
Pelodiscus sinensis
ENSPSIG00000013104
I
0.701
TBPL2
Pan troglodytes
ENSPTRG00000006376
I
0.701
TBP
Pan troglodytes
ENSPTRG00000018827
I
0.701
TBP
Pteropus vampyrus
ENSPVAG00000010820
I
0.701
Tbp
Rattus norvegicus
ENSRNOG00000001489
I
0.701
ENSSHAG00000015821
Sarcophilus harrisii
ENSSHAG00000015821
I
0.701
ENSSSCG00000022683
Sus scrofa
ENSSSCG00000022683
I
0.701
ENSSTOG00000008402
Ictidomys tridecemlineatus
ENSSTOG00000008402
I
0.701
ENSSTOG00000015196
Ictidomys tridecemlineatus
ENSSTOG00000015196
I
0.701
TBP
Tupaia belangeri
ENSTBEG00000004700
I
0.701
TBP
Taeniopygia guttata
ENSTGUG00000009824
I
0.701
tbpl2
Tetraodon nigroviridis
ENSTNIG00000002597
I
0.701
trf3
Takifugu rubripes
ENSTRUG00000009283
I
0.701
ENSTSYG00000001512
Tarsius syrichta
ENSTSYG00000001512
I
0.701
TBP
Tursiops truncatus
ENSTTRG00000014825
I
0.701
ENSXMAG00000014937
Xiphophorus maculatus
ENSXMAG00000014937
I
0.701
SPU_012621
Strongylocentrotus purpuratus
SPU_012621
I
0.701
SPU_014099
Strongylocentrotus purpuratus
SPU_014099
I
0.701
Afo_R001483
Aptenodytes forsteri
Afo_R001483
I
0.701
Afo_R014360
Aptenodytes forsteri
Afo_R014360
I
0.701
Alligator_sinensis_CCG013163.1
Alligator sinensis
Alligator_sinensis_CCG013163.1
I
0.701
ENSBTAP00000010109-D2
Bos grunniens
ENSBTAP00000010109-D2
I
0.701
ENSP00000247219
Macaca fascicularis
ENSP00000247219
I
0.701
ENSP00000375942
Macaca fascicularis
ENSP00000375942
I
0.701
Gfo_R009933
Geospiza fortis
Gfo_R009933
I
0.701
Myotis_brandtii_FAM120B_10014687
Myotis brandtii
Myotis_brandtii_FAM120B_10014687
I
0.701
Ogr19073
Ophisaurus gracilis
Ogr19073
I
0.701
Pvit_02083
Pogona vitticeps
Pvit_02083
I
0.701
estExt_fgenesh2_pg.C_680056
Branchiostoma floridae
estExt_fgenesh2_pg.C_680056
I
0.701
tbp
Xenopus tropicalis
XB-GENE-488470
I
0.701
tbp.L
Xenopus laevis
XB-GENE-6253887
I
0.701
tbp.S
Xenopus laevis
XB-GENE-865786
I
0.701
tbpl2
Xenopus tropicalis
XB-GENE-876138
I
0.701
tbpl2.L
Xenopus laevis
XB-GENE-876147
I
0.701