CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0001663701
(
Protopolystoma xenopodis
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
PXEA_0001663701
T343586_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0001663701-mRNA-1
TBP
99
181
RPQLQNIVCTVYLGCRLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSELQAKLAARKYARIIQKL
Links
Other
TBP
family TFs
Other
Protopolystoma xenopodis
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000010603
Ailuropoda melanoleuca
ENSAMEG00000010603
N
0.906
AMEC012048
Anopheles melas
AMEC012048
N
0.902
ENSACAG00000000993
Anolis carolinensis
ENSACAG00000000993
N
0.892
CLEC006116
Cimex lectularius
CLEC006116
N
0.892
SBAD_0001092401
Soboliphyme baturini
SBAD_0001092401
N
0.880
TBP
Homo sapiens
ENSG00000112592
D
0.872
ASIM_0002035201
Anisakis simplex
ASIM_0002035201
N
0.867
PEQ_0000350901
Parascaris equorum
PEQ_0000350901
N
0.867
TELCIR_16291
Teladorsagia circumcincta
TELCIR_16291
N
0.867
augustus_masked-nMf.1.1.scaf46816-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf46816-processed-gene-0.0
N
0.857
Gorai.007G288000
Gossypium raimondii
Gorai.007G288000
I
0.855
SPBR_07806
Sporothrix brasiliensis
SPBR_07806
N
0.836
ENSSHAG00000009234
Sarcophilus harrisii
ENSSHAG00000009234
N
0.824
fgenesh2_pg.scaffold_68000071
Branchiostoma floridae
fgenesh2_pg.scaffold_68000071
N
0.811
GRMZM2G161418
Zea mays
GRMZM2G161418
I
0.800
cassava28055.m1
Manihot esculenta
cassava28055.m1
N
0.760
Bo5g121420
Brassica oleracea
Bo5g121420
N
0.753
DICVIV_08944
Dictyocaulus viviparus
DICVIV_08944
N
0.735
HPBE_0002665101
Heligmosomoides bakeri
HPBE_0002665101
N
0.720
MCYG_00725
Microsporum canis
MCYG_00725
N
0.718
Traes_6AL_7E0CFDC3C
Triticum aestivum
Traes_6AL_7E0CFDC3C
N
0.700