CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TELCIR_16292
(
Teladorsagia circumcincta
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
TELCIR_16292
T343633_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbp
M00216_2.00
Mus musculus
NWWWWAW
WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.816
0.816
TBP
M08231_2.00
Homo sapiens
YATTTGCATD
HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.816
0.816
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS
SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.816
0.816
Tbp
M09433_2.00
Mus musculus
VTATAAAARS
SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.816
0.816
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.816
0.816
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD
HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.816
0.816
TBP
M11390_2.00
Homo sapiens
KATAAATW
WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.816
0.816
TBP
M11391_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.816
0.816
TBP
M11392_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.816
0.816
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.816
0.816
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW
WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.728
0.728
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.728
0.728
SPT15
M11393_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.728
0.728
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TELCIR_16292
TBP
23
105
MPTLQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEDASRLAARKYARIVQKL
TELCIR_16292
TBP
111
141
FTEFKVVITGAKFKKDIDDAFSQIYPILKGF
Links
Other
TBP
family TFs
Other
Teladorsagia circumcincta
TFs
261 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Side
Drosophila melanogaster
FBgn0032741
D
AMEC015268
Anopheles melas
AMEC015268
I
AATE004348
Anopheles atroparvus
AATE004348
I
ACHR004924
Anopheles christyi
ACHR004924
I
ACOM024390
Anopheles coluzzii
ACOM024390
I
ACUA019797
Anopheles culicifacies
ACUA019797
I
ADIR009436
Anopheles dirus
ADIR009436
I
AEPI003648
Anopheles epiroticus
AEPI003648
I
AFUN000987
Anopheles funestus
AFUN000987
I
AMAM003703
Anopheles maculatus
AMAM003703
I
AALB000480
Anopheles albimanus
AALB000480
I
AMEM013195
Anopheles merus
AMEM013195
I
AMIN001613
Anopheles minimus
AMIN001613
I
AQUA007895
Anopheles quadriannulatus
AQUA007895
I
ASIS013964
Anopheles sinensis
ASIS013964
I
ASTEI04999
Anopheles stephensi
ASTEI04999
I
PPAI009230
Phlebotomus papatasi
PPAI009230
I
AARA009394
Anopheles arabiensis
AARA009394
I
CpipJ_CPIJ016623
Culex pipiens
CpipJ_CPIJ016623
I
GE13222
Drosophila yakuba
FBgn0230916
I
GK24825
Drosophila willistoni
FBgn0226784
I
GJ16129
Drosophila virilis
FBgn0203314
I
GD24173
Drosophila simulans
FBgn0195528
I
GM17313
Drosophila sechellia
FBgn0172223
I
GL18909
Drosophila persimilis
FBgn0156510
I
GI17350
Drosophila mojavensis
FBgn0140094
I
GH10835
Drosophila grimshawi
FBgn0118316
I
GG21149
Drosophila erecta
FBgn0113332
I
GF14690
Drosophila ananassae
FBgn0091717
I
GA10322
Drosophila pseudoobscura
FBgn0070380
I
CPIJ016623
Culex quinquefasciatus
CPIJ016623
I
AGAP028027
Anopheles gambiae
AGAP028027
I
AAEL011056
Aedes aegypti
AAEL011056
I