TELCIR_16292 (Teladorsagia circumcincta)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 TELCIR_16292 T343633_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.816 0.816
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.816 0.816
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.816 0.816
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.816 0.816
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.816 0.816
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.816 0.816
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.816 0.816
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.816 0.816
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.816 0.816
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.816 0.816
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.728 0.728
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.728 0.728
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.728 0.728
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TELCIR_16292 TBP 23 105
TELCIR_16292 TBP 111 141

Links

Other TBP family TFs
Other Teladorsagia circumcincta TFs

261 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Side Drosophila melanogaster FBgn0032741 D
AMEC015268 Anopheles melas AMEC015268 I
AATE004348 Anopheles atroparvus AATE004348 I
ACHR004924 Anopheles christyi ACHR004924 I
ACOM024390 Anopheles coluzzii ACOM024390 I
ACUA019797 Anopheles culicifacies ACUA019797 I
ADIR009436 Anopheles dirus ADIR009436 I
AEPI003648 Anopheles epiroticus AEPI003648 I
AFUN000987 Anopheles funestus AFUN000987 I
AMAM003703 Anopheles maculatus AMAM003703 I
AALB000480 Anopheles albimanus AALB000480 I
AMEM013195 Anopheles merus AMEM013195 I
AMIN001613 Anopheles minimus AMIN001613 I
AQUA007895 Anopheles quadriannulatus AQUA007895 I
ASIS013964 Anopheles sinensis ASIS013964 I
ASTEI04999 Anopheles stephensi ASTEI04999 I
PPAI009230 Phlebotomus papatasi PPAI009230 I
AARA009394 Anopheles arabiensis AARA009394 I
CpipJ_CPIJ016623 Culex pipiens CpipJ_CPIJ016623 I
GE13222 Drosophila yakuba FBgn0230916 I
GK24825 Drosophila willistoni FBgn0226784 I
GJ16129 Drosophila virilis FBgn0203314 I
GD24173 Drosophila simulans FBgn0195528 I
GM17313 Drosophila sechellia FBgn0172223 I
GL18909 Drosophila persimilis FBgn0156510 I
GI17350 Drosophila mojavensis FBgn0140094 I
GH10835 Drosophila grimshawi FBgn0118316 I
GG21149 Drosophila erecta FBgn0113332 I
GF14690 Drosophila ananassae FBgn0091717 I
GA10322 Drosophila pseudoobscura FBgn0070380 I
CPIJ016623 Culex quinquefasciatus CPIJ016623 I
AGAP028027 Anopheles gambiae AGAP028027 I
AAEL011056 Aedes aegypti AAEL011056 I