CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI3G36590
(
Brachypodium distachyon
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
BRADI3G36590
T343809_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI3G36590.1
TCP
135
271
PFRTDRHSKIRTAQGVRDRRMRLSVGVARDFFALQDLLGFDKASNTVDWLLTQSKPAIDRLSLSDSSTPQQGVPAVAAAITGKEKGEAAAAATASSSTSTGCFRDERATERMESIGDVSGDGGEMDWFASGAPAMEQ
Links
Other
TCP
family TFs
Other
Brachypodium distachyon
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC09G08520
Oryza punctata
OPUNC09G08520
I
0.954
Sb02g024450
Sorghum bicolor
Sb02g024450
I
0.949
OPUNC08G13710
Oryza punctata
OPUNC08G13710
I
0.948
Pavir.Ba01820
Panicum virgatum
Pavir.Ba01820
I
0.948
LPERR09G06870
Leersia perrieri
LPERR09G06870
I
0.947
OBART09G10040
Oryza barthii
OBART09G10040
I
0.947
OGLUM09G10300
Oryza glumaepatula
OGLUM09G10300
I
0.947
OS09G0410500
Oryza sativa
OS09G0410500
I
0.947
BGIOSGA030744
Oryza indica
BGIOSGA030744
I
0.946
LPERR08G12880
Leersia perrieri
LPERR08G12880
I
0.946
ONIVA09G09540
Oryza nivara
ONIVA09G09540
I
0.946
ORUFI09G10660
Oryza rufipogon
ORUFI09G10660
I
0.946
Traes_5BL_19F383CC71
Triticum aestivum
Traes_5BL_19F383CC71
I
0.946
Si033183m.g
Setaria italica
Si033183m.g
I
0.945
GRMZM2G064628
Zea mays
GRMZM2G064628
I
0.944
OMERI09G07770
Oryza meridionalis
OMERI09G07770
I
0.944
Pavir.Bb02154
Panicum virgatum
Pavir.Bb02154
I
0.944
MLOC_58142
Hordeum vulgare
MLOC_58142
I
0.942
Si015230m.g
Setaria italica
Si015230m.g
I
0.941
TRIUR3_20728
Triticum urartu
TRIUR3_20728
I
0.941
ORGLA08G0137200
Oryza glaberrima
ORGLA08G0137200
I
0.939
GRMZM2G166687
Zea mays
GRMZM2G166687
I
0.938
MLOC_4614
Hordeum vulgare
MLOC_4614
I
0.938
BRADI4G29980
Brachypodium distachyon
BRADI4G29980
I
0.937
GRMZM2G110242
Zea mays
GRMZM2G110242
I
0.937
OMERI08G12900
Oryza meridionalis
OMERI08G12900
I
0.934
F775_01923
Aegilops tauschii
F775_01923
I
0.933
GRMZM2G060319
Zea mays
GRMZM2G060319
I
0.933
Sb07g021140
Sorghum bicolor
Sb07g021140
I
0.933
OGLUM08G16380
Oryza glumaepatula
OGLUM08G16380
I
0.931
Traes_5DL_46A3B0DAB1
Triticum aestivum
Traes_5DL_46A3B0DAB1
I
0.931
BGIOSGA028717
Oryza indica
BGIOSGA028717
I
0.927
ONIVA08G16720
Oryza nivara
ONIVA08G16720
I
0.927
ORUFI08G17540
Oryza rufipogon
ORUFI08G17540
I
0.927
OS08G0432300
Oryza sativa
OS08G0432300
I
0.927
Pavir.Fb01590
Panicum virgatum
Pavir.Fb01590
I
0.921
OBART08G15630
Oryza barthii
OBART08G15630
N
0.917
GRMZM2G055024
Zea mays
GRMZM2G055024
I
0.909
GRMZM2G031905
Zea mays
GRMZM2G031905
I
0.900
Pavir.Fa00870
Panicum virgatum
Pavir.Fa00870
I
0.899
GRMZM2G062711
Zea mays
GRMZM2G062711
I
0.894
evm.TU.supercontig_179.29
Carica papaya
evm.TU.supercontig_179.29
I
0.862
POPTR_0012s05660
Populus trichocarpa
POPTR_0012s05660
I
0.846
PRUPE_ppa027156mg
Prunus persica
PRUPE_ppa027156mg
I
0.843
Pm015499
Prunus mume
Pm015499
I
0.843
Bo3g071560
Brassica oleracea
Bo3g071560
I
0.842
PGSC0003DMG400005705
Solanum tuberosum
PGSC0003DMG400005705
I
0.842
SapurV1A.0583s0060
Salix purpurea
SapurV1A.0583s0060
I
0.842
Thhalv10021948m.g
Eutrema salsugineum
Thhalv10021948m.g
N
0.841
PDK_20s1689851g001
Phoenix dactylifera
PDK_20s1689851g001
I
0.841
cassava32886.m1
Manihot esculenta
cassava32886.m1
I
0.840
cassava9378.m1
Manihot esculenta
cassava9378.m1
I
0.840
MTR_7g018500
Medicago truncatula
MTR_7g018500
I
0.838
Traes_2AS_1A307CE26
Triticum aestivum
Traes_2AS_1A307CE26
N
0.838
cassava16230.m1
Manihot esculenta
cassava16230.m1
I
0.838
LPERR03G25950
Leersia perrieri
LPERR03G25950
I
0.836
SapurV1A.0301s0010
Salix purpurea
SapurV1A.0301s0010
I
0.835
Bra001710
Brassica rapa
Bra001710
I
0.834
SapurV1A.1895s0010
Salix purpurea
SapurV1A.1895s0010
I
0.834
SapurV1A.1895s0020
Salix purpurea
SapurV1A.1895s0020
I
0.834
Bra034010
Brassica rapa
Bra034010
I
0.833
Bo5g117410
Brassica oleracea
Bo5g117410
N
0.832
OMERI03G27910
Oryza meridionalis
OMERI03G27910
I
0.832
POPTR_0015s03140
Populus trichocarpa
POPTR_0015s03140
I
0.831
Cla016709
Citrullus lanatus
Cla016709
I
0.831
30174.m008721
Ricinus communis
30174.m008721
I
0.831
BRADI1G11060
Brachypodium distachyon
BRADI1G11060
I
0.830
GLYMA18G51581
Glycine max
GLYMA18G51581
I
0.829
Bostr.19424s0807
Boechera stricta
Bostr.19424s0807
I
0.829
Solyc03g119770.2
Solanum lycopersicum
Solyc03g119770.2
I
0.828
Pavir.Ib04362
Panicum virgatum
Pavir.Ib04362
I
0.828
TCM_012252
Theobroma cacao
TCM_012252
I
0.827
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
0.827
chr1.LjB10L14.10.nc
Lotus japonicus
chr1.LjB10L14.10.nc
I
0.827
MTR_6g017055
Medicago truncatula
MTR_6g017055
I
0.826
Gorai.007G007500
Gossypium raimondii
Gorai.007G007500
I
0.826
PGSC0003DMG400003362
Solanum tuberosum
PGSC0003DMG400003362
I
0.825
Cagra.1681s0023
Capsella grandiflora
Cagra.1681s0023
I
0.825
Carubv10013748m.g
Capsella rubella
Carubv10013748m.g
I
0.825
30167.m000856
Ricinus communis
30167.m000856
I
0.824
Aquca_026_00208
Aquilegia coerulea
Aquca_026_00208
I
0.824
Thhalv10019499m.g
Eutrema salsugineum
Thhalv10019499m.g
I
0.824
Pavir.Ia00838
Panicum virgatum
Pavir.Ia00838
I
0.823
SapurV1A.0682s0140
Salix purpurea
SapurV1A.0682s0140
I
0.823