BRADI4G29980 (Brachypodium distachyon)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 BRADI4G29980 T343815_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.860 0.490
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G29980.1 TCP 103 225

Links

Other TCP family TFs
Other Brachypodium distachyon TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.961
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.958
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.951
OBART09G10040 Oryza barthii OBART09G10040 I 0.951
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.951
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.951
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.951
OS09G0410500 Oryza sativa OS09G0410500 I 0.951
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.950
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.948
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.946
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.944
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.944
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.943
Si033183m.g Setaria italica Si033183m.g I 0.940
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.940
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.939
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.939
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.938
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.938
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.937
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.934
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.931
Si015230m.g Setaria italica Si015230m.g I 0.928
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.927
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.926
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.922
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.919
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.918
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.918
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.918
OS08G0432300 Oryza sativa OS08G0432300 I 0.918
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.918
F775_01923 Aegilops tauschii F775_01923 I 0.915
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.913
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.913
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.913
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.907
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.904
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.898
OBART08G15630 Oryza barthii OBART08G15630 N 0.882
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.866
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.864
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.864
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.863
30174.m008721 Ricinus communis 30174.m008721 I 0.863
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.862
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.861
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.860
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.860
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.860
TB1 Oryza sativa OS03G0706500 D 0.860
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.860
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.859
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.859
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.856
Pm015499 Prunus mume Pm015499 I 0.856
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.854
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.854
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.854
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.854
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.854
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.854
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.852
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.852
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.851
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.850
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.849
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.848
Pm030202 Prunus mume Pm030202 I 0.848
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.847
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.847
OBART03G31290 Oryza barthii OBART03G31290 I 0.843
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.843
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.843
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.838
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.838
MDP0000224810 Malus domestica MDP0000224810 N 0.838
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.838
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.837
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.836
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.835
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.835
30167.m000856 Ricinus communis 30167.m000856 I 0.834
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.833
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.833
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.833
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.833
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.833
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.833
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.832
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.832
TCM_012252 Theobroma cacao TCM_012252 I 0.831
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.830
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.830
Si038692m.g Setaria italica Si038692m.g I 0.829
Bo3g071560 Brassica oleracea Bo3g071560 I 0.827
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.827
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.826
TCM_019518 Theobroma cacao TCM_019518 I 0.825
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.824
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.823
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.823