GLYMA17G08761 (Glycine max)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GLYMA17G08761 T343894_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.917 0.353
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.915 0.413
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.912 0.400
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.892 0.367
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.892 0.367
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.881 0.333
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.881 0.333
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.848 0.340
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.822 0.300
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA17G08761.1 TCP 56 388
GLYMA17G08761.2 TCP 56 388
GLYMA17G08761.3 TCP 56 388

Links

Other TCP family TFs
Other Glycine max TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA05G00300 Glycine max GLYMA05G00300 I 0.944
TCM_014288 Theobroma cacao TCM_014288 I 0.929
MDP0000320363 Malus domestica MDP0000320363 I 0.927
chr4.CM0500.330.nd Lotus japonicus chr4.CM0500.330.nd I 0.926
Ca_24196 Cicer arietinum Ca_24196 I 0.925
Gorai.001G076700 Gossypium raimondii Gorai.001G076700 I 0.925
MTR_3g026050 Medicago truncatula MTR_3g026050 I 0.923
Eucgr.B00608 Eucalyptus grandis Eucgr.B00608 I 0.923
Gorai.008G199700 Gossypium raimondii Gorai.008G199700 I 0.923
GLYMA04G32324 Glycine max GLYMA04G32324 I 0.922
PGSC0003DMG400001362 Solanum tuberosum PGSC0003DMG400001362 I 0.922
evm.TU.supercontig_94.62 Carica papaya evm.TU.supercontig_94.62 I 0.921
MDP0000692406 Malus domestica MDP0000692406 I 0.921
Bo7g098260 Brassica oleracea Bo7g098260 I 0.920
Bra012990 Brassica rapa Bra012990 I 0.920
Cla019340 Citrullus lanatus Cla019340 I 0.920
Pavir.Ea02793 Panicum virgatum Pavir.Ea02793 I 0.920
30138.m003959 Ricinus communis 30138.m003959 I 0.919
AMTR_s00154p00072430 Amborella trichopoda AMTR_s00154p00072430 I 0.917
PRUPE_ppa014630mg Prunus persica PRUPE_ppa014630mg I 0.917
Solyc02g089020.1 Solanum lycopersicum Solyc02g089020.1 I 0.917
Pm024946 Prunus mume Pm024946 I 0.917
PK10344.1 Cannabis sativa PK10344.1 D 0.917
OGLUM01G36040 Oryza glumaepatula OGLUM01G36040 I 0.916
TRAES3BF002700090CFD_g Triticum aestivum TRAES3BF002700090CFD_g I 0.916
Cucsa.198300 Cucumis sativus Cucsa.198300 I 0.916
MDP0000120671 Malus domestica MDP0000120671 I 0.916
SapurV1A.0546s0080 Salix purpurea SapurV1A.0546s0080 I 0.916
SapurV1A.2245s0020 Salix purpurea SapurV1A.2245s0020 I 0.916
TCP5 Arabidopsis thaliana AT5G60970 D 0.915
BGIOSGA000770 Oryza indica BGIOSGA000770 I 0.915
OBART01G31910 Oryza barthii OBART01G31910 I 0.915
OMERI01G28950 Oryza meridionalis OMERI01G28950 I 0.915
ONIVA01G36230 Oryza nivara ONIVA01G36230 I 0.915
ORGLA01G0259400 Oryza glaberrima ORGLA01G0259400 I 0.915
ORUFI01G35100 Oryza rufipogon ORUFI01G35100 I 0.915
OS01G0763200 Oryza sativa OS01G0763200 I 0.915
Sb03g035350 Sorghum bicolor Sb03g035350 I 0.915
Ca_13216 Cicer arietinum Ca_13216 I 0.915
Cagra.0083s0006 Capsella grandiflora Cagra.0083s0006 I 0.914
Carubv10026656m.g Capsella rubella Carubv10026656m.g I 0.914
SapurV1A.0323s0010 Salix purpurea SapurV1A.0323s0010 I 0.914
SapurV1A.0901s0090 Salix purpurea SapurV1A.0901s0090 I 0.914
POPTR_0004s11510 Populus trichocarpa POPTR_0004s11510 I 0.913
mgf008626m Mimulus guttatus mgf008626m I 0.913
evm.TU.supercontig_14.188 Carica papaya evm.TU.supercontig_14.188 I 0.913
TCP5 Arabidopsis lyrata fgenesh2_kg.8__2066__AT5G60970.1 D 0.912
POPTR_0017s13050 Populus trichocarpa POPTR_0017s13050 I 0.912
TCM_018809 Theobroma cacao TCM_018809 I 0.912
PTF1 Vitis vinifera VIT_14s0068g00330 I 0.912
Ciclev10020626m.g Citrus clementina Ciclev10020626m.g I 0.912
orange1.1g017725m.g Citrus sinensis orange1.1g017725m.g I 0.912
LjSGA_022391.1 Lotus japonicus LjSGA_022391.1 I 0.912
PGSC0003DMG400024632 Solanum tuberosum PGSC0003DMG400024632 I 0.911
Ca_24948 Cicer arietinum Ca_24948 I 0.911
29905.m000443 Ricinus communis 29905.m000443 I 0.911
cassava30483.valid.m1 Manihot esculenta cassava30483.valid.m1 I 0.911
Cucsa.215290 Cucumis sativus Cucsa.215290 I 0.911
mgf006703m Mimulus guttatus mgf006703m I 0.911
Bostr.26833s0140 Boechera stricta Bostr.26833s0140 I 0.911
MDP0000130524 Malus domestica MDP0000130524 I 0.911
MDP0000199422 Malus domestica MDP0000199422 I 0.911
MDP0000373350 Malus domestica MDP0000373350 I 0.911
Pavir.J15913 Panicum virgatum Pavir.J15913 I 0.911
SapurV1A.0795s0080 Salix purpurea SapurV1A.0795s0080 I 0.911
SapurV1A.4442s0010 Salix purpurea SapurV1A.4442s0010 I 0.911
SapurV1A.4443s0010 Salix purpurea SapurV1A.4443s0010 I 0.911
Thhalv10004440m.g Eutrema salsugineum Thhalv10004440m.g I 0.911
Bo3g004670 Brassica oleracea Bo3g004670 I 0.910
Bra039158 Brassica rapa Bra039158 I 0.910
cassava29094.valid.m1 Manihot esculenta cassava29094.valid.m1 I 0.910
Bo5g152840 Brassica oleracea Bo5g152840 I 0.909
Bra005967 Brassica rapa Bra005967 I 0.909
GRMZM2G035944 Zea mays GRMZM2G035944 I 0.908
GRMZM2G120151 Zea mays GRMZM2G120151 I 0.908
GRMZM2G166946 Zea mays GRMZM2G166946 I 0.908
Sb09g025340 Sorghum bicolor Sb09g025340 I 0.908
Aquca_002_00878 Aquilegia coerulea Aquca_002_00878 I 0.908
Bostr.13129s0160 Boechera stricta Bostr.13129s0160 I 0.908
GLYMA08G27155 Glycine max GLYMA08G27155 I 0.907
POPTR_0015s06980 Populus trichocarpa POPTR_0015s06980 I 0.907
gene04255-v1.0-hybrid Fragaria vesca gene04255-v1.0-hybrid I 0.907
Gorai.006G009800 Gossypium raimondii Gorai.006G009800 I 0.907
Pavir.J35609 Panicum virgatum Pavir.J35609 I 0.907
TCP17 Arabidopsis lyrata fgenesh2_kg.6__773__AT5G08070.1 I 0.906
PRUPE_ppa007243mg Prunus persica PRUPE_ppa007243mg I 0.906
Pm016049 Prunus mume Pm016049 I 0.906
MDP0000253526 Malus domestica MDP0000253526 I 0.906
MDP0000617746 Malus domestica MDP0000617746 I 0.906
BRADI2G50687 Brachypodium distachyon BRADI2G50687 I 0.904
MTR_4g109660 Medicago truncatula MTR_4g109660 I 0.904
Bostr.1460s0130 Boechera stricta Bostr.1460s0130 I 0.904
Lus10032984.g Linum usitatissimum Lus10032984.g I 0.904
GLYMA06G22240 Glycine max GLYMA06G22240 I 0.903
Si022833m.g Setaria italica Si022833m.g I 0.903
Cla018836 Citrullus lanatus Cla018836 I 0.903
Pavir.Ca01337 Panicum virgatum Pavir.Ca01337 I 0.903
Cla010936 Citrullus lanatus Cla010936 I 0.902
Cucsa.113300 Cucumis sativus Cucsa.113300 I 0.902
Eucgr.I02038 Eucalyptus grandis Eucgr.I02038 I 0.902
GLYMA18G50371 Glycine max GLYMA18G50371 I 0.901
GSMUA_Achr6G27420_001 Musa acuminata GSMUA_Achr6G27420_001 I 0.901
mgf007729m Mimulus guttatus mgf007729m I 0.901
Ciclev10011887m.g Citrus clementina Ciclev10011887m.g I 0.901
orange1.1g015799m.g Citrus sinensis orange1.1g015799m.g I 0.901
GSMUA_Achr4G32850_001 Musa acuminata GSMUA_Achr4G32850_001 I 0.900
PGSC0003DMG400004082 Solanum tuberosum PGSC0003DMG400004082 I 0.899
MDP0000594000 Malus domestica MDP0000594000 I 0.899
GLYMA19G03786 Glycine max GLYMA19G03786 I 0.898
LPERR05G18480 Leersia perrieri LPERR05G18480 I 0.898
MTR_6g015350 Medicago truncatula MTR_6g015350 I 0.898
Traes_1AL_79B8C6F15 Triticum aestivum Traes_1AL_79B8C6F15 I 0.898
Bo2g161240 Brassica oleracea Bo2g161240 I 0.897
Bra029344 Brassica rapa Bra029344 I 0.897
Lus10034679.g Linum usitatissimum Lus10034679.g I 0.897
Thhalv10014467m.g Eutrema salsugineum Thhalv10014467m.g I 0.897
PDK_20s1781021g001 Phoenix dactylifera PDK_20s1781021g001 I 0.897
MDP0000202241 Malus domestica MDP0000202241 I 0.896
BGIOSGA020173 Oryza indica BGIOSGA020173 I 0.895
OGLUM05G23780 Oryza glumaepatula OGLUM05G23780 I 0.895
ONIVA05G23460 Oryza nivara ONIVA05G23460 I 0.895
ORGLA05G0197200 Oryza glaberrima ORGLA05G0197200 I 0.895
ORUFI05G23910 Oryza rufipogon ORUFI05G23910 I 0.895
OS05G0513100 Oryza sativa OS05G0513100 I 0.895
Cagra.3823s0015 Capsella grandiflora Cagra.3823s0015 I 0.895
MDP0000534647 Malus domestica MDP0000534647 I 0.895
BRADI2G20060 Brachypodium distachyon BRADI2G20060 I 0.894
PDK_20s1781021g002 Phoenix dactylifera PDK_20s1781021g002 I 0.893
TCP17 Arabidopsis thaliana AT5G08070 D 0.892
F775_18470 Aegilops tauschii F775_18470 I 0.892
Gorai.012G048500 Gossypium raimondii Gorai.012G048500 I 0.892
MDP0000155433 Malus domestica MDP0000155433 I 0.892
MLOC_14785 Hordeum vulgare MLOC_14785 I 0.889
Solyc03g115010.1 Solanum lycopersicum Solyc03g115010.1 I 0.889
gene26101-v1.0-hybrid Fragaria vesca gene26101-v1.0-hybrid I 0.889
Thhalv10021021m.g Eutrema salsugineum Thhalv10021021m.g I 0.889
Solyc06g069460.1 Solanum lycopersicum Solyc06g069460.1 I 0.888
Bo3g055460 Brassica oleracea Bo3g055460 I 0.887
Bra001032 Brassica rapa Bra001032 I 0.887
Cagra.1365s0013 Capsella grandiflora Cagra.1365s0013 I 0.886
PGSC0003DMG400026568 Solanum tuberosum PGSC0003DMG400026568 I 0.882
Si002496m.g Setaria italica Si002496m.g I 0.882
TCP13 Arabidopsis thaliana AT3G02150 D 0.881
PTF1 Arabidopsis lyrata fgenesh2_kg.3__146__AT3G02150.2 I 0.881
OPUNC01G30950 Oryza punctata OPUNC01G30950 I 0.881
cassava32529.m1 Manihot esculenta cassava32529.m1 I 0.881
Carubv10014042m.g Capsella rubella Carubv10014042m.g I 0.881
LPERR01G27380 Leersia perrieri LPERR01G27380 I 0.880
Carubv10001730m.g Capsella rubella Carubv10001730m.g I 0.880
Solyc02g065800.1 Solanum lycopersicum Solyc02g065800.1 I 0.876
MLOC_70266 Hordeum vulgare MLOC_70266 I 0.875
cassava46272.m1 Manihot esculenta cassava46272.m1 I 0.862
MDP0000388684 Malus domestica MDP0000388684 I 0.861
OPUNC05G20130 Oryza punctata OPUNC05G20130 I 0.859
LPERR12G15920 Leersia perrieri LPERR12G15920 I 0.856
OMERI05G20240 Oryza meridionalis OMERI05G20240 I 0.855
MDP0000287069 Malus domestica MDP0000287069 I 0.854
Solyc08g048370.2 Solanum lycopersicum Solyc08g048370.2 I 0.852
PK17676.1 Cannabis sativa PK17676.1 I 0.852
PGSC0003DMG400019904 Solanum tuberosum PGSC0003DMG400019904 I 0.850
LjT20A21.20.nc Lotus japonicus LjT20A21.20.nc D 0.848
BRADI4G01547 Brachypodium distachyon BRADI4G01547 I 0.846
MDP0000927314 Malus domestica MDP0000927314 I 0.845
LPERR01G06830 Leersia perrieri LPERR01G06830 I 0.843
Traes_5BS_77558D2A3 Triticum aestivum Traes_5BS_77558D2A3 I 0.842
Traes_5DS_643EDFE5B Triticum aestivum Traes_5DS_643EDFE5B I 0.842
Cucsa.122730 Cucumis sativus Cucsa.122730 I 0.840
Sb08g021690 Sorghum bicolor Sb08g021690 I 0.839
GRMZM2G180568 Zea mays GRMZM2G180568 I 0.838
MLOC_72581 Hordeum vulgare MLOC_72581 I 0.838
OMERI12G13760 Oryza meridionalis OMERI12G13760 I 0.838
OPUNC12G17090 Oryza punctata OPUNC12G17090 I 0.838
Pavir.Cb00038 Panicum virgatum Pavir.Cb00038 I 0.838
Solyc08g048390.1 Solanum lycopersicum Solyc08g048390.1 I 0.837
SapurV1A.0971s0180 Salix purpurea SapurV1A.0971s0180 I 0.836
SapurV1A.1394s0060 Salix purpurea SapurV1A.1394s0060 I 0.836
Si004564m.g Setaria italica Si004564m.g I 0.835
Traes_2AL_EA60A06AC Triticum aestivum Traes_2AL_EA60A06AC I 0.835
SapurV1A.0232s0150 Salix purpurea SapurV1A.0232s0150 I 0.835
Aquca_057_00119 Aquilegia coerulea Aquca_057_00119 I 0.834
GLYMA08G10350 Glycine max GLYMA08G10350 I 0.832
OMERI01G07200 Oryza meridionalis OMERI01G07200 I 0.832
Traes_2BL_36A3AB3A2 Triticum aestivum Traes_2BL_36A3AB3A2 I 0.832
Ca_05033 Cicer arietinum Ca_05033 I 0.832
Cla023702 Citrullus lanatus Cla023702 I 0.832
Eucgr.K02535 Eucalyptus grandis Eucgr.K02535 I 0.832
Traes_5BL_2DDBAA0C2 Triticum aestivum Traes_5BL_2DDBAA0C2 I 0.831
Pavir.J03475 Panicum virgatum Pavir.J03475 I 0.830
POPTR_0011s02350 Populus trichocarpa POPTR_0011s02350 I 0.829
Sb03g001940 Sorghum bicolor Sb03g001940 I 0.829
Pavir.J37910 Panicum virgatum Pavir.J37910 I 0.829
GLYMA12G14200 Glycine max GLYMA12G14200 I 0.828
GSMUA_Achr4G31520_001 Musa acuminata GSMUA_Achr4G31520_001 I 0.828
Ca_11295 Cicer arietinum Ca_11295 I 0.828
POPTR_0004s06440 Populus trichocarpa POPTR_0004s06440 I 0.827
cassava7638.valid.m1 Manihot esculenta cassava7638.valid.m1 I 0.827
Gorai.011G046000 Gossypium raimondii Gorai.011G046000 I 0.827
Pavir.Ca02949 Panicum virgatum Pavir.Ca02949 I 0.827
AMTR_s00092p00113360 Amborella trichopoda AMTR_s00092p00113360 I 0.825
PCF8 Oryza indica BGIOSGA037799 I 0.825
OGLUM12G20570 Oryza glumaepatula OGLUM12G20570 I 0.825
ONIVA12G17870 Oryza nivara ONIVA12G17870 I 0.825
ORGLA12G0161900 Oryza glaberrima ORGLA12G0161900 I 0.825
Si022811m.g Setaria italica Si022811m.g I 0.825
BRADI2G06890 Brachypodium distachyon BRADI2G06890 I 0.824
MTR_4g079580 Medicago truncatula MTR_4g079580 I 0.824
PRUPE_ppa004612mg Prunus persica PRUPE_ppa004612mg I 0.823
Pavir.J24681 Panicum virgatum Pavir.J24681 I 0.823
PCF5 Oryza indica BGIOSGA002128 I 0.822
GLYMA13G29160 Glycine max GLYMA13G29160 I 0.822
GLYMA15G09910 Glycine max GLYMA15G09910 I 0.822
OBART01G07230 Oryza barthii OBART01G07230 I 0.822
OGLUM01G08160 Oryza glumaepatula OGLUM01G08160 I 0.822
ONIVA01G09270 Oryza nivara ONIVA01G09270 I 0.822
OPUNC01G06940 Oryza punctata OPUNC01G06940 I 0.822
ORGLA01G0062300 Oryza glaberrima ORGLA01G0062300 I 0.822
ORUFI01G07780 Oryza rufipogon ORUFI01G07780 I 0.822
OS01G0213800 Oryza sativa OS01G0213800 D 0.822
TCM_029442 Theobroma cacao TCM_029442 I 0.822
Cla019865 Citrullus lanatus Cla019865 I 0.822
Pm010440 Prunus mume Pm010440 I 0.822
29693.m001968 Ricinus communis 29693.m001968 I 0.822
cassava2420.valid.m1 Manihot esculenta cassava2420.valid.m1 I 0.822
Cucsa.047860 Cucumis sativus Cucsa.047860 I 0.822
Cucsa.111880 Cucumis sativus Cucsa.111880 I 0.822
Ciclev10014986m.g Citrus clementina Ciclev10014986m.g I 0.822
orange1.1g009938m.g Citrus sinensis orange1.1g009938m.g I 0.822
PK16724.1 Cannabis sativa PK16724.1 I 0.822