CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G062711
(
Zea mays
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
GRMZM2G062711
T343916_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS
SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.854
0.635
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM
KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.825
0.712
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G062711_P01
TCP
136
187
PFRTDWHSKIRKAQGVRDRRMRLSVGVTREFFALQDRLGFDKASKTVNWLLA
Links
Other
TCP
family TFs
Other
Zea mays
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G031905
Zea mays
GRMZM2G031905
I
0.979
Traes_2AS_1A307CE26
Triticum aestivum
Traes_2AS_1A307CE26
N
0.946
GRMZM2G060319
Zea mays
GRMZM2G060319
I
0.933
Sb07g021140
Sorghum bicolor
Sb07g021140
I
0.933
GRMZM2G166687
Zea mays
GRMZM2G166687
I
0.931
Si015230m.g
Setaria italica
Si015230m.g
I
0.929
Si033183m.g
Setaria italica
Si033183m.g
I
0.927
Pavir.Ba01820
Panicum virgatum
Pavir.Ba01820
I
0.927
Sb02g024450
Sorghum bicolor
Sb02g024450
I
0.924
GRMZM2G110242
Zea mays
GRMZM2G110242
I
0.922
LPERR09G06870
Leersia perrieri
LPERR09G06870
I
0.921
OPUNC09G08520
Oryza punctata
OPUNC09G08520
I
0.914
GRMZM2G064628
Zea mays
GRMZM2G064628
I
0.911
OBART09G10040
Oryza barthii
OBART09G10040
I
0.911
OGLUM09G10300
Oryza glumaepatula
OGLUM09G10300
I
0.911
OS09G0410500
Oryza sativa
OS09G0410500
I
0.911
Pavir.Bb02154
Panicum virgatum
Pavir.Bb02154
I
0.911
OMERI09G07770
Oryza meridionalis
OMERI09G07770
I
0.910
Pavir.Fa00870
Panicum virgatum
Pavir.Fa00870
I
0.910
BGIOSGA030744
Oryza indica
BGIOSGA030744
I
0.909
ONIVA09G09540
Oryza nivara
ONIVA09G09540
I
0.909
ORUFI09G10660
Oryza rufipogon
ORUFI09G10660
I
0.909
Pavir.Fb01590
Panicum virgatum
Pavir.Fb01590
I
0.908
GRMZM2G055024
Zea mays
GRMZM2G055024
I
0.904
Traes_5DL_46A3B0DAB1
Triticum aestivum
Traes_5DL_46A3B0DAB1
I
0.899
BRADI4G29980
Brachypodium distachyon
BRADI4G29980
I
0.898
F775_01923
Aegilops tauschii
F775_01923
I
0.895
BRADI3G36590
Brachypodium distachyon
BRADI3G36590
N
0.894
GSMUA_Achr2G22480_001
Musa acuminata
GSMUA_Achr2G22480_001
I
0.890
LPERR08G12880
Leersia perrieri
LPERR08G12880
I
0.888
OPUNC08G13710
Oryza punctata
OPUNC08G13710
I
0.883
MLOC_58142
Hordeum vulgare
MLOC_58142
I
0.881
BRC2
Arabidopsis thaliana
AT1G68800
I
0.878
BRC2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000933
I
0.878
Bostr.26959s0002
Boechera stricta
Bostr.26959s0002
I
0.878
Cagra.1157s0001
Capsella grandiflora
Cagra.1157s0001
I
0.878
Carubv10020487m.g
Capsella rubella
Carubv10020487m.g
I
0.878
Traes_5BL_19F383CC71
Triticum aestivum
Traes_5BL_19F383CC71
I
0.874
MLOC_4614
Hordeum vulgare
MLOC_4614
I
0.872
Sb01g010690
Sorghum bicolor
Sb01g010690
I
0.867
ORGLA08G0137200
Oryza glaberrima
ORGLA08G0137200
I
0.865
TRIUR3_20728
Triticum urartu
TRIUR3_20728
I
0.865
ONIVA08G16720
Oryza nivara
ONIVA08G16720
I
0.864
MLOC_70116
Hordeum vulgare
MLOC_70116
I
0.861
Traes_4AL_75D069945
Triticum aestivum
Traes_4AL_75D069945
I
0.861
Traes_4BS_DC076554D
Triticum aestivum
Traes_4BS_DC076554D
I
0.861
Traes_4DS_59A46B69A
Triticum aestivum
Traes_4DS_59A46B69A
I
0.861
TRIUR3_31795
Triticum urartu
TRIUR3_31795
I
0.861
OBART05G22490
Oryza barthii
OBART05G22490
I
0.859
SapurV1A.0682s0140
Salix purpurea
SapurV1A.0682s0140
I
0.858
BGIOSGA028717
Oryza indica
BGIOSGA028717
I
0.856
OGLUM08G16380
Oryza glumaepatula
OGLUM08G16380
I
0.856
OMERI08G12900
Oryza meridionalis
OMERI08G12900
I
0.856
ORUFI08G17540
Oryza rufipogon
ORUFI08G17540
I
0.856
OS08G0432300
Oryza sativa
OS08G0432300
I
0.856
AC233950.1_FG002
Zea mays
AC233950.1_FG002
I
0.855
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
0.855
PK12240.1
Cannabis sativa
PK12240.1
D
0.854
30167.m000856
Ricinus communis
30167.m000856
I
0.853
Lus10035055.g
Linum usitatissimum
Lus10035055.g
I
0.852
cassava10552.m1
Manihot esculenta
cassava10552.m1
I
0.848
OPUNC03G28490
Oryza punctata
OPUNC03G28490
I
0.847
mgf024687m
Mimulus guttatus
mgf024687m
I
0.847
SELMODRAFT_7330
Selaginella moellendorffii
SELMODRAFT_7330
I
0.843
Bostr.26959s0184
Boechera stricta
Bostr.26959s0184
I
0.843
Lus10021713.g
Linum usitatissimum
Lus10021713.g
I
0.842
Cucsa.283930
Cucumis sativus
Cucsa.283930
I
0.839
SELMODRAFT_28794
Selaginella moellendorffii
SELMODRAFT_28794
I
0.838
gene03882-v1.0-hybrid
Fragaria vesca
gene03882-v1.0-hybrid
I
0.837
Ciclev10024246m.g
Citrus clementina
Ciclev10024246m.g
I
0.836
orange1.1g035911m.g
Citrus sinensis
orange1.1g035911m.g
I
0.836
POPTR_0017s13980
Populus trichocarpa
POPTR_0017s13980
I
0.835
Cucsa.280880
Cucumis sativus
Cucsa.280880
I
0.833
Aquca_002_01093
Aquilegia coerulea
Aquca_002_01093
I
0.832
MDP0000623166
Malus domestica
MDP0000623166
N
0.831
TCM_012252
Theobroma cacao
TCM_012252
I
0.830
BRADI1G11060
Brachypodium distachyon
BRADI1G11060
I
0.828
Traes_2BS_03909B330
Triticum aestivum
Traes_2BS_03909B330
N
0.828
evm.TU.supercontig_179.29
Carica papaya
evm.TU.supercontig_179.29
I
0.828
Gorai.008G285300
Gossypium raimondii
Gorai.008G285300
I
0.828
PDK_20s1689851g001
Phoenix dactylifera
PDK_20s1689851g001
I
0.828
ONIVA06G04550
Oryza nivara
ONIVA06G04550
N
0.827
BGIOSGA013417
Oryza indica
BGIOSGA013417
I
0.825
OGLUM03G31540
Oryza glumaepatula
OGLUM03G31540
I
0.825
ONIVA03G32600
Oryza nivara
ONIVA03G32600
I
0.825
ORUFI03G32570
Oryza rufipogon
ORUFI03G32570
I
0.825
TB1
Oryza sativa
OS03G0706500
D
0.825
Cagra.1125s0016
Capsella grandiflora
Cagra.1125s0016
I
0.824
Eucgr.K02654
Eucalyptus grandis
Eucgr.K02654
I
0.822