CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GRMZM2G088440
(
Zea mays
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
GRMZM2G088440
T343920_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G088440_P01
TCP
1
168
MRLSVGVAREFFKLQDRLGFDKANKTVNWLLAQSKPAIDRLNRIIGVEKTASQQEIKKVYHKLALRLHPDKNPGDEETKEKFQLLQKVISILGDAEKRALYDETGITDDDALVGEAANNLQEYFRTMYKKVMEANIEEFEVKYRGSDSEKMDLKELYTKYKGNMNRNS
Links
Other
TCP
family TFs
Other
Zea mays
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G135461
Zea mays
GRMZM2G135461
N
0.940
AC234521.1_FG006
Zea mays
AC234521.1_FG006
N
0.928
Traes_2DS_4C8E5F416
Triticum aestivum
Traes_2DS_4C8E5F416
N
0.905
GRMZM2G359599
Zea mays
GRMZM2G359599
N
0.903
Traes_2BS_03909B330
Triticum aestivum
Traes_2BS_03909B330
N
0.902
GRMZM2G170232
Zea mays
GRMZM2G170232
N
0.893
MLOC_58142
Hordeum vulgare
MLOC_58142
I
0.892
GRMZM2G458087
Zea mays
GRMZM2G458087
N
0.871
PGSC0003DMG400005705
Solanum tuberosum
PGSC0003DMG400005705
I
0.855
OB03G38320
Oryza brachyantha
OB03G38320
I
0.824