CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G414114
(
Zea mays
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
GRMZM2G414114
T343940_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G414114_P01
TCP
180
340
PHAQGLRDRRMRLSVGVAREFLALQDRLGFDKASKTLNWLLAQSKPPIDCLVDAADQVAVVTGGRPTLVKGRELGSNSSTCCLTDSRWDKSLNCSKCVTYCFQILGVGKTTSQQEIKKAYHKLALRLHPDKNPGDEVTEADIEEFEAKYRGSDYEKTDLKG
Links
Other
TCP
family TFs
Other
Zea mays
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G359599
Zea mays
GRMZM2G359599
N
0.962
GRMZM2G458087
Zea mays
GRMZM2G458087
N
0.958
GRMZM2G170232
Zea mays
GRMZM2G170232
N
0.940
GRMZM2G166687
Zea mays
GRMZM2G166687
I
0.930
GRMZM2G135461
Zea mays
GRMZM2G135461
N
0.907
Pavir.Fb01590
Panicum virgatum
Pavir.Fb01590
I
0.897
GRMZM2G060319
Zea mays
GRMZM2G060319
I
0.893
Sb07g021140
Sorghum bicolor
Sb07g021140
I
0.893
Si015230m.g
Setaria italica
Si015230m.g
I
0.877
GRMZM2G055024
Zea mays
GRMZM2G055024
I
0.876
F775_01923
Aegilops tauschii
F775_01923
I
0.870
AC234521.1_FG006
Zea mays
AC234521.1_FG006
N
0.869
Pavir.Fa00870
Panicum virgatum
Pavir.Fa00870
I
0.861
MLOC_58142
Hordeum vulgare
MLOC_58142
I
0.860
Traes_2DS_4C8E5F416
Triticum aestivum
Traes_2DS_4C8E5F416
N
0.856
GRMZM2G424261
Zea mays
GRMZM2G424261
N
0.845
OPUNC09G08520
Oryza punctata
OPUNC09G08520
I
0.832
Pavir.Bb02154
Panicum virgatum
Pavir.Bb02154
I
0.831
Si033183m.g
Setaria italica
Si033183m.g
I
0.826
Pavir.Ba01820
Panicum virgatum
Pavir.Ba01820
I
0.826
LPERR08G12880
Leersia perrieri
LPERR08G12880
I
0.824
BGIOSGA030744
Oryza indica
BGIOSGA030744
I
0.822
OBART09G10040
Oryza barthii
OBART09G10040
I
0.822
OGLUM09G10300
Oryza glumaepatula
OGLUM09G10300
I
0.822
OMERI09G07770
Oryza meridionalis
OMERI09G07770
I
0.822
ONIVA09G09540
Oryza nivara
ONIVA09G09540
I
0.822
ORUFI09G10660
Oryza rufipogon
ORUFI09G10660
I
0.822
OS09G0410500
Oryza sativa
OS09G0410500
I
0.822