LPERR08G12880 (Leersia perrieri)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 LPERR08G12880 T344007_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.842 0.495
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR08G12880.1 TCP 60 189

Links

Other TCP family TFs
Other Leersia perrieri TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.955
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.946
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.940
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.937
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.937
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.937
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.935
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.934
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.933
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.932
OBART09G10040 Oryza barthii OBART09G10040 I 0.932
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.932
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.932
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.932
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.932
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.932
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.932
OS09G0410500 Oryza sativa OS09G0410500 I 0.932
Si015230m.g Setaria italica Si015230m.g I 0.931
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.930
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.930
Si033183m.g Setaria italica Si033183m.g I 0.930
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.930
F775_01923 Aegilops tauschii F775_01923 I 0.929
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.929
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.928
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.928
OS08G0432300 Oryza sativa OS08G0432300 I 0.928
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.927
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.926
OBART08G15630 Oryza barthii OBART08G15630 N 0.926
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.924
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.924
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.920
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.916
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.916
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.912
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.905
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.903
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.894
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.888
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.880
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.878
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.877
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.877
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.877
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.875
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.875
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.874
30174.m008721 Ricinus communis 30174.m008721 I 0.868
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.857
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.856
Pm015499 Prunus mume Pm015499 I 0.852
MDP0000224810 Malus domestica MDP0000224810 N 0.851
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.849
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.847
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.847
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.847
Si038692m.g Setaria italica Si038692m.g I 0.844
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.844
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.842
OBART03G31290 Oryza barthii OBART03G31290 I 0.842
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.842
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.842
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.842
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.842
TB1 Oryza sativa OS03G0706500 D 0.842
Cla016709 Citrullus lanatus Cla016709 I 0.842
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.840
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.840
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.840
Cla019282 Citrullus lanatus Cla019282 N 0.840
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.840
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.840
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.838
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.837
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.837
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.837
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.835
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.834
Bo3g071560 Brassica oleracea Bo3g071560 I 0.833
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.833
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.833
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.832
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.832
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.831
TCM_019518 Theobroma cacao TCM_019518 I 0.831
Bo5g117410 Brassica oleracea Bo5g117410 N 0.830
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.830
Traes_2BS_03909B330 Triticum aestivum Traes_2BS_03909B330 N 0.830
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.830
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.830
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.830
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.830
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.830
mgf026636m Mimulus guttatus mgf026636m I 0.829
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.829
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.828
Pm030202 Prunus mume Pm030202 I 0.828
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.827
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.827
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.827
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.827
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.826
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.826
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.826
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.826
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.826
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.826
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.825
Bra001710 Brassica rapa Bra001710 I 0.824
GRMZM2G414114 Zea mays GRMZM2G414114 N 0.824
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.824
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.823
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.823
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.822