MTR_7g018500 (Medicago truncatula)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 MTR_7g018500 T344048_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.916 0.466
TCP1
M07276_2.00
Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH

DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY
Dap-seq
OMalley et al.(2016)
TCP1_col_a
0.874 0.481
PK19717.1
M01318_2.00
Cannabis sativa
GGGSCCCMC

GKGGGSCCC
PBM
Lambert et al.(2019)
pTH10142
0.869 0.481
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH21816 TCP 118 249

Links

Other TCP family TFs
Other Medicago truncatula TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCP1 Arabidopsis thaliana AT1G67260 D 0.874
PK19717.1 Cannabis sativa PK19717.1 D 0.869
PK12240.1 Cannabis sativa PK12240.1 D 0.916
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.837
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.833
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.854
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.896
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.896
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.862
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.834
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.896
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.862
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.882
mgf026636m Mimulus guttatus mgf026636m I 0.858
mgf022233m Mimulus guttatus mgf022233m I 0.886
mgf019480m Mimulus guttatus mgf019480m I 0.900
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.899
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.881
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.899
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.916
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.908
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.905
30167.m000856 Ricinus communis 30167.m000856 I 0.907
29738.m001041 Ricinus communis 29738.m001041 I 0.897
Pm029002 Prunus mume Pm029002 I 0.880
MDP0000173048 Malus domestica MDP0000173048 I 0.889
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.920
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.944
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.961
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.864
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.922
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.890
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.829
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.829
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.890
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.837
MDP0000272980 Malus domestica MDP0000272980 I 0.870
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.890
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.850
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.878
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.874
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.837
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.873
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.901
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.911
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.892
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.879
Pm015499 Prunus mume Pm015499 I 0.874
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.909
Cla016709 Citrullus lanatus Cla016709 I 0.916
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.942
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.925
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.828
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.827
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.946
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.936
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.952
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.936
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.952
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.949
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.828
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.884
Bra038350 Brassica rapa Bra038350 I 0.871
Bra034010 Brassica rapa Bra034010 I 0.871
Bra004212 Brassica rapa Bra004212 I 0.905
Bra004097 Brassica rapa Bra004097 I 0.894
Bo6g103670 Brassica oleracea Bo6g103670 I 0.880
Bo6g099040 Brassica oleracea Bo6g099040 I 0.872
Bo2g061250 Brassica oleracea Bo2g061250 I 0.871
Bo2g055640 Brassica oleracea Bo2g055640 I 0.865
BRC2 Arabidopsis thaliana AT1G68800 I 0.909
Si033183m.g Setaria italica Si033183m.g I 0.837
Cla007227 Citrullus lanatus Cla007227 I 0.905
Cla002355 Citrullus lanatus Cla002355 I 0.901
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.877
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.878
TCM_019518 Theobroma cacao TCM_019518 I 0.903
TCM_011874 Theobroma cacao TCM_011874 I 0.880
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.901
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.909
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.862
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.905
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.837
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.874
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.880
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.905
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.903
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.904
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.906
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.849
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.865
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.838
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.824
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.824