CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM04G24370
(
Oryza glumaepatula
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
OGLUM04G24370
T344094_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM04G24370.1
TCP
64
106
VLTRELGHKSNGETVQWLLQQAEPAIVTATGTGVSVDIPRALP
Links
Other
TCP
family TFs
Other
Oryza glumaepatula
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART01G21400
Oryza barthii
OBART01G21400
I
0.930
ORUFI01G24090
Oryza rufipogon
ORUFI01G24090
I
0.925
OMERI04G14330
Oryza meridionalis
OMERI04G14330
I
0.921
Si039258m.g
Setaria italica
Si039258m.g
N
0.914
GLYMA07G29015
Glycine max
GLYMA07G29015
I
0.877
MLOC_61513
Hordeum vulgare
MLOC_61513
I
0.877
OBART10G07150
Oryza barthii
OBART10G07150
N
0.875
OLONG_019922
Oryza longistaminata
OLONG_019922
I
0.873
OMERI02G02280
Oryza meridionalis
OMERI02G02280
I
0.869
GSMUA_AchrUn_randomG08350_001
Musa acuminata
GSMUA_AchrUn_randomG08350_001
I
0.859
ORUFI09G18080
Oryza rufipogon
ORUFI09G18080
I
0.853
GSMUA_Achr11G17370_001
Musa acuminata
GSMUA_Achr11G17370_001
I
0.848
GSMUA_Achr5G03320_001
Musa acuminata
GSMUA_Achr5G03320_001
I
0.848
GSMUA_Achr2G10690_001
Musa acuminata
GSMUA_Achr2G10690_001
I
0.836
BGIOSGA015954
Oryza indica
BGIOSGA015954
I
0.831
Bra032973
Brassica rapa
Bra032973
N
0.828
Lus10008444.g
Linum usitatissimum
Lus10008444.g
I
0.827