CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_5BL_19F383CC71
(
Triticum aestivum
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
Traes_5BL_19F383CC71
T344470_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM
KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.838
0.442
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_5BL_19F383CC71.1
TCP
101
233
PFRTDRHSKIRTAQGVRDRRMRLSLDVARDFFALQDQLGFDKASKTVDWLLTQSKPAIDRLSESSRLNAARAGEDGMSSLSSVEREGRRLKETELATGSGKGAADVEKAMRARGGGTSVLMEHRREMNGGLMS
Links
Other
TCP
family TFs
Other
Triticum aestivum
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WRKY38
Arabidopsis thaliana
AT5G22570
D
OPUNC05G07410
Oryza punctata
OPUNC05G07410
I
OS01G0820700
Oryza sativa
OS01G0820700
I
ORUFI05G08750
Oryza rufipogon
ORUFI05G08750
I
ORUFI01G38690
Oryza rufipogon
ORUFI01G38690
I
ORUFI01G38660
Oryza rufipogon
ORUFI01G38660
I
ORGLA11G0202000
Oryza glaberrima
ORGLA11G0202000
I
ORGLA05G0070000
Oryza glaberrima
ORGLA05G0070000
I
ORGLA01G0292200
Oryza glaberrima
ORGLA01G0292200
I
ORGLA01G0291800
Oryza glaberrima
ORGLA01G0291800
I
OS01G0821600
Oryza sativa
OS01G0821600
I
OPUNC01G34280
Oryza punctata
OPUNC01G34280
I
ONIVA11G01240
Oryza nivara
ONIVA11G01240
I
ONIVA05G08650
Oryza nivara
ONIVA05G08650
I
ONIVA01G40390
Oryza nivara
ONIVA01G40390
I
ONIVA01G40340
Oryza nivara
ONIVA01G40340
I
OMERI01G32510
Oryza meridionalis
OMERI01G32510
I
OLONG_019907
Oryza longistaminata
OLONG_019907
I
OLONG_000636
Oryza longistaminata
OLONG_000636
I
Traes_5BL_F853EA802
Triticum aestivum
Traes_5BL_F853EA802
I
Pavir.J39511
Panicum virgatum
Pavir.J39511
I
Pavir.Ha01933
Panicum virgatum
Pavir.Ha01933
I
Pavir.Eb03563
Panicum virgatum
Pavir.Eb03563
I
Pavir.Ea03258
Panicum virgatum
Pavir.Ea03258
I
Pavir.Cb02194
Panicum virgatum
Pavir.Cb02194
I
Pavir.Ca00459
Panicum virgatum
Pavir.Ca00459
I
TRIUR3_17401
Triticum urartu
TRIUR3_17401
I
TRIUR3_14306
Triticum urartu
TRIUR3_14306
I
OPUNC05G17980
Oryza punctata
OPUNC05G17980
I
Traes_3DL_48F7A19D2
Triticum aestivum
Traes_3DL_48F7A19D2
I
TRAES3BF005100010CFD_g
Triticum aestivum
TRAES3BF005100010CFD_g
I
TRAES3BF001300030CFD_g
Triticum aestivum
TRAES3BF001300030CFD_g
I
Traes_3AL_2297D6E18
Triticum aestivum
Traes_3AL_2297D6E18
I
Si028202m.g
Setaria italica
Si028202m.g
I
Si027574m.g
Setaria italica
Si027574m.g
I
Si025181m.g
Setaria italica
Si025181m.g
I
WRKY38
Arabidopsis lyrata
scaffold_602308.1
I
OGLUM11G00850
Oryza glumaepatula
OGLUM11G00850
I
BGIOSGA004703
Oryza indica
BGIOSGA004703
I
BGIOSGA004705
Oryza indica
BGIOSGA004705
I
BGIOSGA017556
Oryza indica
BGIOSGA017556
I
BGIOSGA034612
Oryza indica
BGIOSGA034612
I
BRADI2G53495
Brachypodium distachyon
BRADI2G53495
I
BRADI2G53520
Brachypodium distachyon
BRADI2G53520
I
BRADI4G44350
Brachypodium distachyon
BRADI4G44350
I
BRADI4G44360
Brachypodium distachyon
BRADI4G44360
I
F775_03184
Aegilops tauschii
F775_03184
I
F775_23182
Aegilops tauschii
F775_23182
I
GRMZM2G059562
Zea mays
GRMZM2G059562
I
LPERR05G06630
Leersia perrieri
LPERR05G06630
I
LPERR11G00960
Leersia perrieri
LPERR11G00960
I
OGLUM11G00870
Oryza glumaepatula
OGLUM11G00870
I
OBART01G35380
Oryza barthii
OBART01G35380
I
OB01G44140
Oryza brachyantha
OB01G44140
I
OBART05G08130
Oryza barthii
OBART05G08130
I
OBART11G01110
Oryza barthii
OBART11G01110
I
OGLUM01G39390
Oryza glumaepatula
OGLUM01G39390
I
OGLUM05G08540
Oryza glumaepatula
OGLUM05G08540
I
OB05G17240
Oryza brachyantha
OB05G17240
I
F775_02479
Aegilops tauschii
F775_02479
N
OMERI11G01570
Oryza meridionalis
OMERI11G01570
N
Pavir.J34713
Panicum virgatum
Pavir.J34713
N
Traes_5AL_69A969FF4
Triticum aestivum
Traes_5AL_69A969FF4
N
Pavir.J09582
Panicum virgatum
Pavir.J09582
N
TRIUR3_01445
Triticum urartu
TRIUR3_01445
N
TRIUR3_01447
Triticum urartu
TRIUR3_01447
N
TRIUR3_16097
Triticum urartu
TRIUR3_16097
N
BRADI2G53500
Brachypodium distachyon
BRADI2G53500
N
TRIUR3_20905
Triticum urartu
TRIUR3_20905
N
TRIUR3_26571
Triticum urartu
TRIUR3_26571
N
TRIUR3_31234
Triticum urartu
TRIUR3_31234
N
Pavir.Ca00084
Panicum virgatum
Pavir.Ca00084
N
OBART12G00850
Oryza barthii
OBART12G00850
N
BGIOSGA036756
Oryza indica
BGIOSGA036756
N
Sb05g001220
Sorghum bicolor
Sb05g001220
N
LPERR12G01080
Leersia perrieri
LPERR12G01080
N
LPERR11G00970
Leersia perrieri
LPERR11G00970
N
ORGLA12G0007600
Oryza glaberrima
ORGLA12G0007600
N
OPUNC12G00990
Oryza punctata
OPUNC12G00990
N
GRMZM2G400559
Zea mays
GRMZM2G400559
N
GRMZM2G169564
Zea mays
GRMZM2G169564
N
OPUNC11G00980
Oryza punctata
OPUNC11G00980
N
OS11G0117500
Oryza sativa
OS11G0117500
N
OS12G0116700
Oryza sativa
OS12G0116700
N
BRADI4G44370
Brachypodium distachyon
BRADI4G44370
N
Sb08g002560
Sorghum bicolor
Sb08g002560
N
OB11G10760
Oryza brachyantha
OB11G10760
N
Si010764m.g
Setaria italica
Si010764m.g
N
Si019098m.g
Setaria italica
Si019098m.g
N
F775_04954
Aegilops tauschii
F775_04954
N
F775_04232
Aegilops tauschii
F775_04232
N
Si027876m.g
Setaria italica
Si027876m.g
N
OB12G11030
Oryza brachyantha
OB12G11030
N
F775_02480
Aegilops tauschii
F775_02480
N