Cla018797 (Citrullus lanatus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Cla018797 T344540_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla018797 TCP 10 161

Links

Other TCP family TFs
Other Citrullus lanatus TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.926
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.896
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.877
MDP0000219838 Malus domestica MDP0000219838 N 0.875
MDP0000224810 Malus domestica MDP0000224810 N 0.875
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.873
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.872
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.866
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.858
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.855
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.854
Bo1g117490 Brassica oleracea Bo1g117490 I 0.853
Bra037579 Brassica rapa Bra037579 I 0.853
TCM_012252 Theobroma cacao TCM_012252 I 0.852
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.850
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.850
Pm030202 Prunus mume Pm030202 I 0.850
BRC1 Arabidopsis thaliana AT3G18550 I 0.848
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.848
Cla019282 Citrullus lanatus Cla019282 N 0.847
30174.m008721 Ricinus communis 30174.m008721 I 0.847
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.844
F775_01923 Aegilops tauschii F775_01923 I 0.840
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.840
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.840
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.839
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.837
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.836
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.835
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.835
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.835
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.834
Bra001710 Brassica rapa Bra001710 I 0.833
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.833
Pm015499 Prunus mume Pm015499 I 0.833
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.832
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.832
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.832
Bo3g071560 Brassica oleracea Bo3g071560 I 0.831
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.830
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.830
OBART09G10040 Oryza barthii OBART09G10040 I 0.829
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.829
OS09G0410500 Oryza sativa OS09G0410500 I 0.829
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.828
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.828
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.826
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.826
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.826
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.826
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.825
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.825
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.824
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.823
Bo5g117410 Brassica oleracea Bo5g117410 N 0.822
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.822
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.822
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.822