CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf024687m
(
Mimulus guttatus
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
mgf024687m
T344677_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS
SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.863
0.397
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM
KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.822
0.433
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf024687m
TCP
168
308
KKKKDRHSKIETARGPRDRRMRLSLEVARKFFDLQDLLGYDKASRTVEWLLRSSNSAIRDLSVDSNRRSCSTLVTVTGGAAATNSNTTASSTMGEEEVVSNSSKKPKPKAKKKIRSTVPRESRRKARERARERTSQKRRLS
Links
Other
TCP
family TFs
Other
Mimulus guttatus
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10024246m.g
Citrus clementina
Ciclev10024246m.g
I
0.914
orange1.1g035911m.g
Citrus sinensis
orange1.1g035911m.g
I
0.914
BRC2
Arabidopsis thaliana
AT1G68800
I
0.912
BRC2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000933
I
0.912
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
0.911
Cucsa.280880
Cucumis sativus
Cucsa.280880
I
0.904
Bostr.26959s0002
Boechera stricta
Bostr.26959s0002
I
0.900
Cagra.1157s0001
Capsella grandiflora
Cagra.1157s0001
I
0.900
Carubv10020487m.g
Capsella rubella
Carubv10020487m.g
I
0.900
Lus10035055.g
Linum usitatissimum
Lus10035055.g
I
0.895
TCM_012252
Theobroma cacao
TCM_012252
I
0.892
MDP0000272980
Malus domestica
MDP0000272980
I
0.889
30167.m000856
Ricinus communis
30167.m000856
I
0.888
Gorai.008G285300
Gossypium raimondii
Gorai.008G285300
I
0.887
PRUPE_ppa015026mg
Prunus persica
PRUPE_ppa015026mg
I
0.886
Pm030202
Prunus mume
Pm030202
I
0.886
Aquca_002_01093
Aquilegia coerulea
Aquca_002_01093
I
0.886
GSMUA_Achr2G22480_001
Musa acuminata
GSMUA_Achr2G22480_001
I
0.882
Lus10021713.g
Linum usitatissimum
Lus10021713.g
I
0.880
cassava10552.m1
Manihot esculenta
cassava10552.m1
I
0.877
MDP0000224810
Malus domestica
MDP0000224810
N
0.874
cassava32886.m1
Manihot esculenta
cassava32886.m1
I
0.870
cassava9378.m1
Manihot esculenta
cassava9378.m1
I
0.870
SapurV1A.0682s0140
Salix purpurea
SapurV1A.0682s0140
I
0.867
Traes_4BS_DC076554D
Triticum aestivum
Traes_4BS_DC076554D
I
0.866
Traes_4AL_75D069945
Triticum aestivum
Traes_4AL_75D069945
I
0.865
Traes_4DS_59A46B69A
Triticum aestivum
Traes_4DS_59A46B69A
I
0.865
TRIUR3_31795
Triticum urartu
TRIUR3_31795
I
0.865
Cla002355
Citrullus lanatus
Cla002355
I
0.865
gene03882-v1.0-hybrid
Fragaria vesca
gene03882-v1.0-hybrid
I
0.865
PRUPE_ppa027156mg
Prunus persica
PRUPE_ppa027156mg
I
0.864
30174.m008721
Ricinus communis
30174.m008721
I
0.864
SapurV1A.0583s0060
Salix purpurea
SapurV1A.0583s0060
I
0.864
PGSC0003DMG400004054
Solanum tuberosum
PGSC0003DMG400004054
N
0.863
Sb01g010690
Sorghum bicolor
Sb01g010690
I
0.863
Solyc06g069240.1
Solanum lycopersicum
Solyc06g069240.1
N
0.863
Cucsa.283930
Cucumis sativus
Cucsa.283930
I
0.863
PK12240.1
Cannabis sativa
PK12240.1
D
0.863
GLYMA17G13065
Glycine max
GLYMA17G13065
I
0.862
LjSGA_018294.2
Lotus japonicus
LjSGA_018294.2
I
0.862
PDK_20s1689851g001
Phoenix dactylifera
PDK_20s1689851g001
I
0.862
Gorai.007G007500
Gossypium raimondii
Gorai.007G007500
I
0.861
Pm015499
Prunus mume
Pm015499
I
0.860
PGSC0003DMG400005705
Solanum tuberosum
PGSC0003DMG400005705
I
0.859
Solyc03g119770.2
Solanum lycopersicum
Solyc03g119770.2
I
0.859
MLOC_70116
Hordeum vulgare
MLOC_70116
I
0.857
POPTR_0012s05660
Populus trichocarpa
POPTR_0012s05660
I
0.856
GRMZM2G031905
Zea mays
GRMZM2G031905
I
0.855
POPTR_0015s03140
Populus trichocarpa
POPTR_0015s03140
I
0.855
Bostr.26959s0184
Boechera stricta
Bostr.26959s0184
I
0.854
GLYMA04G22407
Glycine max
GLYMA04G22407
I
0.852
Traes_5DL_46A3B0DAB1
Triticum aestivum
Traes_5DL_46A3B0DAB1
I
0.851
POPTR_0017s13980
Populus trichocarpa
POPTR_0017s13980
I
0.849
OPUNC03G28490
Oryza punctata
OPUNC03G28490
I
0.848
Cucsa.238090
Cucumis sativus
Cucsa.238090
I
0.848
GRMZM2G062711
Zea mays
GRMZM2G062711
I
0.847
AC233950.1_FG002
Zea mays
AC233950.1_FG002
I
0.846
MDP0000219838
Malus domestica
MDP0000219838
N
0.846
mgf026636m
Mimulus guttatus
mgf026636m
I
0.844
BRADI1G11060
Brachypodium distachyon
BRADI1G11060
I
0.843
MTR_1g103380
Medicago truncatula
MTR_1g103380
I
0.843
TCP1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2001059
I
0.840
Solyc05g009900.1
Solanum lycopersicum
Solyc05g009900.1
I
0.840
SapurV1A.0301s0010
Salix purpurea
SapurV1A.0301s0010
I
0.840
SapurV1A.1895s0010
Salix purpurea
SapurV1A.1895s0010
I
0.839
SapurV1A.1895s0020
Salix purpurea
SapurV1A.1895s0020
I
0.839
Ciclev10033382m.g
Citrus clementina
Ciclev10033382m.g
I
0.838
orange1.1g039323m.g
Citrus sinensis
orange1.1g039323m.g
I
0.838
BRC2
Vitis vinifera
VIT_01s0011g02920
I
0.837
MDP0000173048
Malus domestica
MDP0000173048
I
0.836
chr5.CM0357.550.nc
Lotus japonicus
chr5.CM0357.550.nc
I
0.836
POPTR_0010s14030
Populus trichocarpa
POPTR_0010s14030
I
0.835
evm.TU.supercontig_1401.1
Carica papaya
evm.TU.supercontig_1401.1
I
0.834
GRMZM2G110242
Zea mays
GRMZM2G110242
I
0.833
GSMUA_Achr10G25520_001
Musa acuminata
GSMUA_Achr10G25520_001
I
0.832
Solyc04g006980.1
Solanum lycopersicum
Solyc04g006980.1
I
0.832
Cla019282
Citrullus lanatus
Cla019282
N
0.832
Cucsa.113660
Cucumis sativus
Cucsa.113660
N
0.832
Carubv10020555m.g
Capsella rubella
Carubv10020555m.g
I
0.832
SapurV1A.0304s0080
Salix purpurea
SapurV1A.0304s0080
I
0.832
Bra004097
Brassica rapa
Bra004097
I
0.831
PRUPE_ppa016240mg
Prunus persica
PRUPE_ppa016240mg
I
0.831
Pm029002
Prunus mume
Pm029002
I
0.831
GLYMA05G07943
Glycine max
GLYMA05G07943
I
0.830
TCP1
Vitis vinifera
VIT_14s0083g00150
I
0.829
Cagra.1125s0016
Capsella grandiflora
Cagra.1125s0016
I
0.828
PGSC0003DMG400000823
Solanum tuberosum
PGSC0003DMG400000823
I
0.827
TCM_011874
Theobroma cacao
TCM_011874
I
0.827
Cucsa.031600
Cucumis sativus
Cucsa.031600
I
0.827
ONIVA08G16720
Oryza nivara
ONIVA08G16720
I
0.826
Gorai.008G186800
Gossypium raimondii
Gorai.008G186800
I
0.826
POPTR_0008s11470
Populus trichocarpa
POPTR_0008s11470
I
0.825
Bo2g061250
Brassica oleracea
Bo2g061250
I
0.824
Bra038350
Brassica rapa
Bra038350
I
0.824
GLYMA06G23410
Glycine max
GLYMA06G23410
N
0.824
Gorai.001G200400
Gossypium raimondii
Gorai.001G200400
I
0.824
BGIOSGA028717
Oryza indica
BGIOSGA028717
I
0.823
OGLUM08G16380
Oryza glumaepatula
OGLUM08G16380
I
0.823
ORUFI08G17540
Oryza rufipogon
ORUFI08G17540
I
0.823
OS08G0432300
Oryza sativa
OS08G0432300
I
0.823
PGSC0003DMG400007467
Solanum tuberosum
PGSC0003DMG400007467
I
0.823
BGIOSGA013417
Oryza indica
BGIOSGA013417
I
0.822
OGLUM03G31540
Oryza glumaepatula
OGLUM03G31540
I
0.822
ONIVA03G32600
Oryza nivara
ONIVA03G32600
I
0.822
ORUFI03G32570
Oryza rufipogon
ORUFI03G32570
I
0.822
TB1
Oryza sativa
OS03G0706500
D
0.822